Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Col25a1Q99MQ5 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col25a1Q99MQ5 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col25a1Q99MQ5 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col25a1Q99MQ5 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col25a1Q99MQ5 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col25a1Q99MQ5 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Col25a1Q99MQ5 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Col25a1Q99MQ5 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Col25a1Q99MQ5 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Col25a1Q99MQ5 Gm37292-201ENSMUST00000192062 758 ntBASIC18.65■□□□□ 0.58
Col25a1Q99MQ5 Gm5864-201ENSMUST00000202263 970 ntBASIC18.65■□□□□ 0.58
Col25a1Q99MQ5 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col25a1Q99MQ5 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Col25a1Q99MQ5 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Col25a1Q99MQ5 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col25a1Q99MQ5 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col25a1Q99MQ5 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Col25a1Q99MQ5 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Col25a1Q99MQ5 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Col25a1Q99MQ5 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col25a1Q99MQ5 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col25a1Q99MQ5 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.64■□□□□ 0.57
Col25a1Q99MQ5 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col25a1Q99MQ5 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Col25a1Q99MQ5 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC18.64■□□□□ 0.57
Col25a1Q99MQ5 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Col25a1Q99MQ5 Gm5587-201ENSMUST00000206270 674 ntBASIC18.64■□□□□ 0.57
Col25a1Q99MQ5 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Col25a1Q99MQ5 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col25a1Q99MQ5 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.64■□□□□ 0.57
Col25a1Q99MQ5 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Col25a1Q99MQ5 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Col25a1Q99MQ5 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Col25a1Q99MQ5 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Col25a1Q99MQ5 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Col25a1Q99MQ5 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col25a1Q99MQ5 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col25a1Q99MQ5 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.63■□□□□ 0.57
Col25a1Q99MQ5 Mir3081-201ENSMUST00000175305 84 ntBASIC18.63■□□□□ 0.57
Col25a1Q99MQ5 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC18.63■□□□□ 0.57
Col25a1Q99MQ5 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col25a1Q99MQ5 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col25a1Q99MQ5 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.63■□□□□ 0.57
Col25a1Q99MQ5 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Col25a1Q99MQ5 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col25a1Q99MQ5 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col25a1Q99MQ5 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col25a1Q99MQ5 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Col25a1Q99MQ5 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col25a1Q99MQ5 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Col25a1Q99MQ5 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Col25a1Q99MQ5 Gm34391-201ENSMUST00000203706 907 ntBASIC18.62■□□□□ 0.57
Col25a1Q99MQ5 Gm18206-201ENSMUST00000207027 926 ntBASIC18.62■□□□□ 0.57
Col25a1Q99MQ5 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC18.62■□□□□ 0.57
Col25a1Q99MQ5 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Col25a1Q99MQ5 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
Col25a1Q99MQ5 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col25a1Q99MQ5 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col25a1Q99MQ5 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col25a1Q99MQ5 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.62■□□□□ 0.57
Col25a1Q99MQ5 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col25a1Q99MQ5 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col25a1Q99MQ5 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col25a1Q99MQ5 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col25a1Q99MQ5 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col25a1Q99MQ5 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col25a1Q99MQ5 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col25a1Q99MQ5 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col25a1Q99MQ5 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Col25a1Q99MQ5 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col25a1Q99MQ5 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Col25a1Q99MQ5 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col25a1Q99MQ5 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col25a1Q99MQ5 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col25a1Q99MQ5 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Col25a1Q99MQ5 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Col25a1Q99MQ5 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col25a1Q99MQ5 Gm18733-201ENSMUST00000173950 856 ntBASIC18.6■□□□□ 0.57
Col25a1Q99MQ5 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Col25a1Q99MQ5 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col25a1Q99MQ5 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Col25a1Q99MQ5 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Col25a1Q99MQ5 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Col25a1Q99MQ5 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col25a1Q99MQ5 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col25a1Q99MQ5 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col25a1Q99MQ5 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC18.59■□□□□ 0.57
Col25a1Q99MQ5 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Col25a1Q99MQ5 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Col25a1Q99MQ5 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Col25a1Q99MQ5 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.59■□□□□ 0.57
Col25a1Q99MQ5 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC18.59■□□□□ 0.57
Col25a1Q99MQ5 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col25a1Q99MQ5 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col25a1Q99MQ5 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Col25a1Q99MQ5 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Col25a1Q99MQ5 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Col25a1Q99MQ5 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Col25a1Q99MQ5 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms