Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Col20a1Q923P0 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Col20a1Q923P0 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Col20a1Q923P0 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Col20a1Q923P0 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC21.29■■□□□ 1
Col20a1Q923P0 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Col20a1Q923P0 AC108858.1-201ENSMUST00000228461 1498 ntBASIC21.29■■□□□ 1
Col20a1Q923P0 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Col20a1Q923P0 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Col20a1Q923P0 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC21.29■■□□□ 1
Col20a1Q923P0 Gm7712-202ENSMUST00000222331 1510 ntBASIC21.29■■□□□ 1
Col20a1Q923P0 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC21.29■■□□□ 1
Col20a1Q923P0 Gm20472-201ENSMUST00000174403 1240 ntBASIC21.29■■□□□ 1
Col20a1Q923P0 Arhgef4-208ENSMUST00000211073 171 ntBASIC21.29■■□□□ 1
Col20a1Q923P0 AC135963.1-201ENSMUST00000211640 717 ntBASIC21.29■■□□□ 1
Col20a1Q923P0 Timm23-208ENSMUST00000226683 750 ntBASIC21.29■■□□□ 1
Col20a1Q923P0 AC156016.1-201ENSMUST00000227190 1035 ntBASIC21.29■■□□□ 1
Col20a1Q923P0 Odf3b-204ENSMUST00000227834 930 ntBASIC21.29■■□□□ 1
Col20a1Q923P0 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Col20a1Q923P0 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Col20a1Q923P0 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Col20a1Q923P0 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC21.29■■□□□ 1
Col20a1Q923P0 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Col20a1Q923P0 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Col20a1Q923P0 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Col20a1Q923P0 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Col20a1Q923P0 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Col20a1Q923P0 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Col20a1Q923P0 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Col20a1Q923P0 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Col20a1Q923P0 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC21.28■■□□□ 1
Col20a1Q923P0 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC21.28■■□□□ 1
Col20a1Q923P0 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Col20a1Q923P0 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC21.28■■□□□ 1
Col20a1Q923P0 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Col20a1Q923P0 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Col20a1Q923P0 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Col20a1Q923P0 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Col20a1Q923P0 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC21.27■■□□□ 1
Col20a1Q923P0 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC21.27■■□□□ 1
Col20a1Q923P0 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC21.27■■□□□ 1
Col20a1Q923P0 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Col20a1Q923P0 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Col20a1Q923P0 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC21.27■■□□□ 1
Col20a1Q923P0 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Col20a1Q923P0 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC21.27■□□□□ 0.99
Col20a1Q923P0 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Col20a1Q923P0 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC21.27■□□□□ 0.99
Col20a1Q923P0 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Col20a1Q923P0 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Col20a1Q923P0 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC21.27■□□□□ 0.99
Col20a1Q923P0 Tgds-204ENSMUST00000228543 1594 ntBASIC21.27■□□□□ 0.99
Col20a1Q923P0 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Col20a1Q923P0 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Col20a1Q923P0 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Col20a1Q923P0 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Col20a1Q923P0 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Col20a1Q923P0 Gm43213-201ENSMUST00000151866 1790 ntBASIC21.26■□□□□ 0.99
Col20a1Q923P0 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Col20a1Q923P0 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Col20a1Q923P0 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Col20a1Q923P0 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Col20a1Q923P0 Gm13836-201ENSMUST00000121159 501 ntBASIC21.26■□□□□ 0.99
Col20a1Q923P0 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC21.26■□□□□ 0.99
Col20a1Q923P0 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Col20a1Q923P0 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Col20a1Q923P0 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Col20a1Q923P0 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC21.26■□□□□ 0.99
Col20a1Q923P0 Gm43231-201ENSMUST00000202960 2258 ntBASIC21.25■□□□□ 0.99
Col20a1Q923P0 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Col20a1Q923P0 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Col20a1Q923P0 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Col20a1Q923P0 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Col20a1Q923P0 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Col20a1Q923P0 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Col20a1Q923P0 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Col20a1Q923P0 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Col20a1Q923P0 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Col20a1Q923P0 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
Col20a1Q923P0 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Col20a1Q923P0 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Col20a1Q923P0 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Col20a1Q923P0 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Col20a1Q923P0 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Col20a1Q923P0 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Col20a1Q923P0 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Col20a1Q923P0 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Col20a1Q923P0 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Col20a1Q923P0 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Col20a1Q923P0 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Col20a1Q923P0 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Col20a1Q923P0 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC21.23■□□□□ 0.99
Col20a1Q923P0 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Col20a1Q923P0 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Col20a1Q923P0 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Col20a1Q923P0 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC21.22■□□□□ 0.99
Col20a1Q923P0 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC21.22■□□□□ 0.99
Col20a1Q923P0 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Col20a1Q923P0 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Col20a1Q923P0 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC21.22■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms