Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb4Q91XZ6 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb4Q91XZ6 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb4Q91XZ6 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.86■□□□□ 0.45
Pcdhb4Q91XZ6 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.86■□□□□ 0.45
Pcdhb4Q91XZ6 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb4Q91XZ6 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb4Q91XZ6 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb4Q91XZ6 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.86■□□□□ 0.45
Pcdhb4Q91XZ6 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb4Q91XZ6 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb4Q91XZ6 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb4Q91XZ6 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb4Q91XZ6 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb4Q91XZ6 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Pcdhb4Q91XZ6 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb4Q91XZ6 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.86■□□□□ 0.45
Pcdhb4Q91XZ6 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb4Q91XZ6 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.85■□□□□ 0.45
Pcdhb4Q91XZ6 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb4Q91XZ6 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb4Q91XZ6 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb4Q91XZ6 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb4Q91XZ6 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb4Q91XZ6 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.85■□□□□ 0.45
Pcdhb4Q91XZ6 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb4Q91XZ6 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb4Q91XZ6 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Pcdhb4Q91XZ6 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb4Q91XZ6 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb4Q91XZ6 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb4Q91XZ6 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb4Q91XZ6 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb4Q91XZ6 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb4Q91XZ6 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb4Q91XZ6 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb4Q91XZ6 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb4Q91XZ6 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb4Q91XZ6 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.84■□□□□ 0.45
Pcdhb4Q91XZ6 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
Pcdhb4Q91XZ6 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb4Q91XZ6 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb4Q91XZ6 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb4Q91XZ6 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb4Q91XZ6 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Pcdhb4Q91XZ6 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb4Q91XZ6 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Pcdhb4Q91XZ6 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdhb4Q91XZ6 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdhb4Q91XZ6 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdhb4Q91XZ6 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
Pcdhb4Q91XZ6 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdhb4Q91XZ6 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.83■□□□□ 0.45
Pcdhb4Q91XZ6 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdhb4Q91XZ6 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.83■□□□□ 0.44
Pcdhb4Q91XZ6 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb4Q91XZ6 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb4Q91XZ6 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb4Q91XZ6 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Pcdhb4Q91XZ6 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb4Q91XZ6 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb4Q91XZ6 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb4Q91XZ6 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Pcdhb4Q91XZ6 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb4Q91XZ6 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Pcdhb4Q91XZ6 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb4Q91XZ6 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
Pcdhb4Q91XZ6 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb4Q91XZ6 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.82■□□□□ 0.44
Pcdhb4Q91XZ6 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb4Q91XZ6 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb4Q91XZ6 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb4Q91XZ6 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Pcdhb4Q91XZ6 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb4Q91XZ6 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb4Q91XZ6 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb4Q91XZ6 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb4Q91XZ6 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.82■□□□□ 0.44
Pcdhb4Q91XZ6 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb4Q91XZ6 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb4Q91XZ6 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb4Q91XZ6 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb4Q91XZ6 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb4Q91XZ6 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb4Q91XZ6 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb4Q91XZ6 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb4Q91XZ6 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb4Q91XZ6 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb4Q91XZ6 AV356131-201ENSMUST00000206201 750 ntBASIC17.81■□□□□ 0.44
Pcdhb4Q91XZ6 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.81■□□□□ 0.44
Pcdhb4Q91XZ6 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb4Q91XZ6 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb4Q91XZ6 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Pcdhb4Q91XZ6 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb4Q91XZ6 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb4Q91XZ6 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.81■□□□□ 0.44
Pcdhb4Q91XZ6 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.81■□□□□ 0.44
Pcdhb4Q91XZ6 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Pcdhb4Q91XZ6 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb4Q91XZ6 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms