Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb6Q91XZ4 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.52■□□□□ 0.56
Pcdhb6Q91XZ4 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb6Q91XZ4 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Pcdhb6Q91XZ4 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb6Q91XZ4 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb6Q91XZ4 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb6Q91XZ4 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb6Q91XZ4 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.52■□□□□ 0.56
Pcdhb6Q91XZ4 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb6Q91XZ4 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdhb6Q91XZ4 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdhb6Q91XZ4 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdhb6Q91XZ4 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdhb6Q91XZ4 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.51■□□□□ 0.55
Pcdhb6Q91XZ4 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb6Q91XZ4 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Pcdhb6Q91XZ4 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.51■□□□□ 0.55
Pcdhb6Q91XZ4 Gm5408-201ENSMUST00000197998 747 ntBASIC18.51■□□□□ 0.55
Pcdhb6Q91XZ4 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.51■□□□□ 0.55
Pcdhb6Q91XZ4 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb6Q91XZ4 Gm10602-201ENSMUST00000098239 609 ntBASIC18.51■□□□□ 0.55
Pcdhb6Q91XZ4 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb6Q91XZ4 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Pcdhb6Q91XZ4 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb6Q91XZ4 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb6Q91XZ4 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Pcdhb6Q91XZ4 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Pcdhb6Q91XZ4 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb6Q91XZ4 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb6Q91XZ4 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb6Q91XZ4 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.5■□□□□ 0.55
Pcdhb6Q91XZ4 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.5■□□□□ 0.55
Pcdhb6Q91XZ4 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb6Q91XZ4 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb6Q91XZ4 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb6Q91XZ4 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Pcdhb6Q91XZ4 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb6Q91XZ4 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb6Q91XZ4 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.5■□□□□ 0.55
Pcdhb6Q91XZ4 Flg-201ENSMUST00000050758 1488 ntBASIC18.5■□□□□ 0.55
Pcdhb6Q91XZ4 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb6Q91XZ4 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb6Q91XZ4 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
Pcdhb6Q91XZ4 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.5■□□□□ 0.55
Pcdhb6Q91XZ4 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb6Q91XZ4 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb6Q91XZ4 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb6Q91XZ4 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
Pcdhb6Q91XZ4 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb6Q91XZ4 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.49■□□□□ 0.55
Pcdhb6Q91XZ4 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb6Q91XZ4 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb6Q91XZ4 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb6Q91XZ4 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.49■□□□□ 0.55
Pcdhb6Q91XZ4 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.49■□□□□ 0.55
Pcdhb6Q91XZ4 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.49■□□□□ 0.55
Pcdhb6Q91XZ4 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb6Q91XZ4 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb6Q91XZ4 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb6Q91XZ4 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb6Q91XZ4 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Pcdhb6Q91XZ4 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Pcdhb6Q91XZ4 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb6Q91XZ4 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb6Q91XZ4 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb6Q91XZ4 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Pcdhb6Q91XZ4 Rarb-207ENSMUST00000225921 2756 ntBASIC18.48■□□□□ 0.55
Pcdhb6Q91XZ4 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb6Q91XZ4 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb6Q91XZ4 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb6Q91XZ4 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb6Q91XZ4 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.48■□□□□ 0.55
Pcdhb6Q91XZ4 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Pcdhb6Q91XZ4 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb6Q91XZ4 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb6Q91XZ4 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.48■□□□□ 0.55
Pcdhb6Q91XZ4 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb6Q91XZ4 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb6Q91XZ4 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb6Q91XZ4 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb6Q91XZ4 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb6Q91XZ4 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.48■□□□□ 0.55
Pcdhb6Q91XZ4 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb6Q91XZ4 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb6Q91XZ4 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.48■□□□□ 0.55
Pcdhb6Q91XZ4 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb6Q91XZ4 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb6Q91XZ4 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb6Q91XZ4 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.47■□□□□ 0.55
Pcdhb6Q91XZ4 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb6Q91XZ4 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb6Q91XZ4 Gm4968-201ENSMUST00000071458 858 ntBASIC18.47■□□□□ 0.55
Pcdhb6Q91XZ4 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb6Q91XZ4 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb6Q91XZ4 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.47■□□□□ 0.55
Pcdhb6Q91XZ4 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.46■□□□□ 0.55
Pcdhb6Q91XZ4 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.46■□□□□ 0.55
Pcdhb6Q91XZ4 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb6Q91XZ4 Gm11927-201ENSMUST00000118472 759 ntBASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms