Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhgc5Q91XW9 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhgc5Q91XW9 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhgc5Q91XW9 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhgc5Q91XW9 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhgc5Q91XW9 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhgc5Q91XW9 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhgc5Q91XW9 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.53■□□□□ 0.88
Pcdhgc5Q91XW9 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhgc5Q91XW9 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhgc5Q91XW9 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhgc5Q91XW9 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC20.53■□□□□ 0.88
Pcdhgc5Q91XW9 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhgc5Q91XW9 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
Pcdhgc5Q91XW9 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhgc5Q91XW9 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhgc5Q91XW9 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Pcdhgc5Q91XW9 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhgc5Q91XW9 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhgc5Q91XW9 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhgc5Q91XW9 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhgc5Q91XW9 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhgc5Q91XW9 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhgc5Q91XW9 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhgc5Q91XW9 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC20.52■□□□□ 0.88
Pcdhgc5Q91XW9 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC20.52■□□□□ 0.88
Pcdhgc5Q91XW9 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhgc5Q91XW9 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhgc5Q91XW9 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhgc5Q91XW9 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Pcdhgc5Q91XW9 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhgc5Q91XW9 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhgc5Q91XW9 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Pcdhgc5Q91XW9 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhgc5Q91XW9 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhgc5Q91XW9 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC20.51■□□□□ 0.87
Pcdhgc5Q91XW9 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhgc5Q91XW9 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhgc5Q91XW9 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhgc5Q91XW9 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Pcdhgc5Q91XW9 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Pcdhgc5Q91XW9 Alkbh1-212ENSMUST00000185301 408 ntBASIC20.5■□□□□ 0.87
Pcdhgc5Q91XW9 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC20.5■□□□□ 0.87
Pcdhgc5Q91XW9 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Pcdhgc5Q91XW9 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.5■□□□□ 0.87
Pcdhgc5Q91XW9 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhgc5Q91XW9 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC20.5■□□□□ 0.87
Pcdhgc5Q91XW9 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhgc5Q91XW9 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhgc5Q91XW9 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhgc5Q91XW9 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhgc5Q91XW9 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhgc5Q91XW9 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhgc5Q91XW9 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhgc5Q91XW9 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhgc5Q91XW9 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhgc5Q91XW9 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhgc5Q91XW9 Gm37811-201ENSMUST00000192416 2601 ntBASIC20.48■□□□□ 0.87
Pcdhgc5Q91XW9 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhgc5Q91XW9 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhgc5Q91XW9 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhgc5Q91XW9 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhgc5Q91XW9 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhgc5Q91XW9 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhgc5Q91XW9 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhgc5Q91XW9 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhgc5Q91XW9 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhgc5Q91XW9 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhgc5Q91XW9 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhgc5Q91XW9 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Pcdhgc5Q91XW9 Gm11927-201ENSMUST00000118472 759 ntBASIC20.47■□□□□ 0.87
Pcdhgc5Q91XW9 Gm6433-201ENSMUST00000118634 875 ntBASIC20.47■□□□□ 0.87
Pcdhgc5Q91XW9 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhgc5Q91XW9 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhgc5Q91XW9 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhgc5Q91XW9 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.47■□□□□ 0.87
Pcdhgc5Q91XW9 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhgc5Q91XW9 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhgc5Q91XW9 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Pcdhgc5Q91XW9 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
Pcdhgc5Q91XW9 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Pcdhgc5Q91XW9 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhgc5Q91XW9 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhgc5Q91XW9 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhgc5Q91XW9 AC175538.1-201ENSMUST00000225343 1269 ntBASIC20.46■□□□□ 0.87
Pcdhgc5Q91XW9 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhgc5Q91XW9 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Pcdhgc5Q91XW9 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhgc5Q91XW9 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhgc5Q91XW9 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhgc5Q91XW9 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC20.46■□□□□ 0.87
Pcdhgc5Q91XW9 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhgc5Q91XW9 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.87
Pcdhgc5Q91XW9 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhgc5Q91XW9 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhgc5Q91XW9 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Pcdhgc5Q91XW9 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhgc5Q91XW9 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhgc5Q91XW9 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC20.45■□□□□ 0.86
Pcdhgc5Q91XW9 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms