Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.02■□□□□ 0.8
Ddx39aQ8VDW0 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ddx39aQ8VDW0 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
Ddx39aQ8VDW0 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ddx39aQ8VDW0 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Ddx39aQ8VDW0 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx39aQ8VDW0 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx39aQ8VDW0 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx39aQ8VDW0 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC20.01■□□□□ 0.79
Ddx39aQ8VDW0 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Ddx39aQ8VDW0 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx39aQ8VDW0 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx39aQ8VDW0 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC20.01■□□□□ 0.79
Ddx39aQ8VDW0 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx39aQ8VDW0 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC20.01■□□□□ 0.79
Ddx39aQ8VDW0 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Ddx39aQ8VDW0 Gm12382-201ENSMUST00000122005 922 ntBASIC20.01■□□□□ 0.79
Ddx39aQ8VDW0 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx39aQ8VDW0 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC20.01■□□□□ 0.79
Ddx39aQ8VDW0 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC20.01■□□□□ 0.79
Ddx39aQ8VDW0 AC135963.1-201ENSMUST00000211640 717 ntBASIC20.01■□□□□ 0.79
Ddx39aQ8VDW0 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC20.01■□□□□ 0.79
Ddx39aQ8VDW0 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
Ddx39aQ8VDW0 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx39aQ8VDW0 Gm38345-201ENSMUST00000192635 1748 ntBASIC20.01■□□□□ 0.79
Ddx39aQ8VDW0 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx39aQ8VDW0 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.01■□□□□ 0.79
Ddx39aQ8VDW0 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx39aQ8VDW0 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx39aQ8VDW0 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx39aQ8VDW0 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC20.01■□□□□ 0.79
Ddx39aQ8VDW0 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx39aQ8VDW0 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
Ddx39aQ8VDW0 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ddx39aQ8VDW0 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ddx39aQ8VDW0 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Ddx39aQ8VDW0 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ddx39aQ8VDW0 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20■□□□□ 0.79
Ddx39aQ8VDW0 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC20■□□□□ 0.79
Ddx39aQ8VDW0 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
Ddx39aQ8VDW0 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ddx39aQ8VDW0 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Ddx39aQ8VDW0 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
Ddx39aQ8VDW0 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ddx39aQ8VDW0 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ddx39aQ8VDW0 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ddx39aQ8VDW0 Gm9194-201ENSMUST00000220749 1447 ntBASIC20■□□□□ 0.79
Ddx39aQ8VDW0 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Ddx39aQ8VDW0 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Ddx39aQ8VDW0 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ddx39aQ8VDW0 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Ddx39aQ8VDW0 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Ddx39aQ8VDW0 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Ddx39aQ8VDW0 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC19.99■□□□□ 0.79
Ddx39aQ8VDW0 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ddx39aQ8VDW0 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ddx39aQ8VDW0 Mir6349-201ENSMUST00000184059 97 ntBASIC19.99■□□□□ 0.79
Ddx39aQ8VDW0 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Ddx39aQ8VDW0 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ddx39aQ8VDW0 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ddx39aQ8VDW0 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ddx39aQ8VDW0 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ddx39aQ8VDW0 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC19.98■□□□□ 0.79
Ddx39aQ8VDW0 Gm16042-201ENSMUST00000204813 1247 ntBASIC19.98■□□□□ 0.79
Ddx39aQ8VDW0 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ddx39aQ8VDW0 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ddx39aQ8VDW0 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ddx39aQ8VDW0 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ddx39aQ8VDW0 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ddx39aQ8VDW0 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.97■□□□□ 0.79
Ddx39aQ8VDW0 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx39aQ8VDW0 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx39aQ8VDW0 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx39aQ8VDW0 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Ddx39aQ8VDW0 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.97■□□□□ 0.79
Ddx39aQ8VDW0 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.97■□□□□ 0.79
Ddx39aQ8VDW0 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx39aQ8VDW0 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Ddx39aQ8VDW0 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx39aQ8VDW0 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx39aQ8VDW0 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.96■□□□□ 0.79
Ddx39aQ8VDW0 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx39aQ8VDW0 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx39aQ8VDW0 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.96■□□□□ 0.79
Ddx39aQ8VDW0 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx39aQ8VDW0 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx39aQ8VDW0 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC19.96■□□□□ 0.79
Ddx39aQ8VDW0 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.96■□□□□ 0.79
Ddx39aQ8VDW0 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC19.96■□□□□ 0.79
Ddx39aQ8VDW0 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx39aQ8VDW0 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.96■□□□□ 0.79
Ddx39aQ8VDW0 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.96■□□□□ 0.79
Ddx39aQ8VDW0 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx39aQ8VDW0 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx39aQ8VDW0 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx39aQ8VDW0 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx39aQ8VDW0 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Ddx39aQ8VDW0 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Ddx39aQ8VDW0 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Ddx39aQ8VDW0 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms