Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ccdc9Q8VC31 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ccdc9Q8VC31 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ccdc9Q8VC31 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ccdc9Q8VC31 Gm15820-201ENSMUST00000201566 728 ntBASIC21.7■■□□□ 1.06
Ccdc9Q8VC31 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.7■■□□□ 1.06
Ccdc9Q8VC31 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ccdc9Q8VC31 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ccdc9Q8VC31 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ccdc9Q8VC31 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc9Q8VC31 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc9Q8VC31 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc9Q8VC31 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc9Q8VC31 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Ccdc9Q8VC31 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc9Q8VC31 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC21.69■■□□□ 1.06
Ccdc9Q8VC31 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc9Q8VC31 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.69■■□□□ 1.06
Ccdc9Q8VC31 Gm40881-201ENSMUST00000223397 166 ntBASIC21.69■■□□□ 1.06
Ccdc9Q8VC31 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc9Q8VC31 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc9Q8VC31 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc9Q8VC31 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc9Q8VC31 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc9Q8VC31 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc9Q8VC31 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Ccdc9Q8VC31 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ccdc9Q8VC31 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ccdc9Q8VC31 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Ccdc9Q8VC31 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Ccdc9Q8VC31 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Ccdc9Q8VC31 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ccdc9Q8VC31 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ccdc9Q8VC31 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ccdc9Q8VC31 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Ccdc9Q8VC31 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ccdc9Q8VC31 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ccdc9Q8VC31 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Ccdc9Q8VC31 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.67■■□□□ 1.06
Ccdc9Q8VC31 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ccdc9Q8VC31 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ccdc9Q8VC31 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ccdc9Q8VC31 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ccdc9Q8VC31 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ccdc9Q8VC31 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ccdc9Q8VC31 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ccdc9Q8VC31 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC21.66■■□□□ 1.06
Ccdc9Q8VC31 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.66■■□□□ 1.06
Ccdc9Q8VC31 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ccdc9Q8VC31 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ccdc9Q8VC31 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ccdc9Q8VC31 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Ccdc9Q8VC31 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ccdc9Q8VC31 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Ccdc9Q8VC31 Gm45906-201ENSMUST00000208911 1430 ntBASIC21.65■■□□□ 1.06
Ccdc9Q8VC31 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC21.65■■□□□ 1.06
Ccdc9Q8VC31 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC21.65■■□□□ 1.06
Ccdc9Q8VC31 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Ccdc9Q8VC31 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Ccdc9Q8VC31 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Ccdc9Q8VC31 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ccdc9Q8VC31 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Ccdc9Q8VC31 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Ccdc9Q8VC31 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Ccdc9Q8VC31 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ccdc9Q8VC31 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ccdc9Q8VC31 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ccdc9Q8VC31 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ccdc9Q8VC31 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ccdc9Q8VC31 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Ccdc9Q8VC31 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ccdc9Q8VC31 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
Ccdc9Q8VC31 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ccdc9Q8VC31 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc9Q8VC31 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc9Q8VC31 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc9Q8VC31 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc9Q8VC31 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc9Q8VC31 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC21.63■■□□□ 1.05
Ccdc9Q8VC31 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc9Q8VC31 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc9Q8VC31 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Ccdc9Q8VC31 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.63■■□□□ 1.05
Ccdc9Q8VC31 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc9Q8VC31 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Ccdc9Q8VC31 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc9Q8VC31 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc9Q8VC31 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc9Q8VC31 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc9Q8VC31 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc9Q8VC31 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc9Q8VC31 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc9Q8VC31 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc9Q8VC31 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.62■■□□□ 1.05
Ccdc9Q8VC31 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Ccdc9Q8VC31 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc9Q8VC31 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc9Q8VC31 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc9Q8VC31 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC21.61■■□□□ 1.05
Ccdc9Q8VC31 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms