Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim68Q8K243 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim68Q8K243 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim68Q8K243 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim68Q8K243 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim68Q8K243 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trim68Q8K243 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim68Q8K243 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trim68Q8K243 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim68Q8K243 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim68Q8K243 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim68Q8K243 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim68Q8K243 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim68Q8K243 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Trim68Q8K243 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim68Q8K243 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Trim68Q8K243 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Trim68Q8K243 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trim68Q8K243 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim68Q8K243 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
Trim68Q8K243 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim68Q8K243 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim68Q8K243 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim68Q8K243 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim68Q8K243 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim68Q8K243 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim68Q8K243 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trim68Q8K243 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim68Q8K243 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim68Q8K243 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim68Q8K243 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim68Q8K243 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trim68Q8K243 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC19.47■□□□□ 0.71
Trim68Q8K243 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim68Q8K243 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim68Q8K243 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim68Q8K243 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Trim68Q8K243 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.46■□□□□ 0.71
Trim68Q8K243 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim68Q8K243 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim68Q8K243 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim68Q8K243 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim68Q8K243 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.46■□□□□ 0.71
Trim68Q8K243 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.46■□□□□ 0.71
Trim68Q8K243 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim68Q8K243 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Trim68Q8K243 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim68Q8K243 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim68Q8K243 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim68Q8K243 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trim68Q8K243 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
Trim68Q8K243 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim68Q8K243 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.45■□□□□ 0.7
Trim68Q8K243 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim68Q8K243 Gm21362-201ENSMUST00000194272 928 ntBASIC19.45■□□□□ 0.7
Trim68Q8K243 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trim68Q8K243 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim68Q8K243 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trim68Q8K243 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trim68Q8K243 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim68Q8K243 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim68Q8K243 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim68Q8K243 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim68Q8K243 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim68Q8K243 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Trim68Q8K243 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim68Q8K243 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim68Q8K243 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Trim68Q8K243 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trim68Q8K243 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trim68Q8K243 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.44■□□□□ 0.7
Trim68Q8K243 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim68Q8K243 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim68Q8K243 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim68Q8K243 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim68Q8K243 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trim68Q8K243 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Trim68Q8K243 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim68Q8K243 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim68Q8K243 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trim68Q8K243 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trim68Q8K243 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC19.43■□□□□ 0.7
Trim68Q8K243 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trim68Q8K243 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC19.43■□□□□ 0.7
Trim68Q8K243 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim68Q8K243 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trim68Q8K243 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.43■□□□□ 0.7
Trim68Q8K243 AC175538.1-201ENSMUST00000225343 1269 ntBASIC19.43■□□□□ 0.7
Trim68Q8K243 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC19.43■□□□□ 0.7
Trim68Q8K243 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim68Q8K243 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim68Q8K243 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.43■□□□□ 0.7
Trim68Q8K243 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim68Q8K243 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim68Q8K243 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim68Q8K243 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim68Q8K243 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim68Q8K243 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim68Q8K243 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC19.42■□□□□ 0.7
Trim68Q8K243 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms