Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Rdh1Q8CGV4 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.5■□□□□ 0.39
Rdh1Q8CGV4 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rdh1Q8CGV4 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rdh1Q8CGV4 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
Rdh1Q8CGV4 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rdh1Q8CGV4 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rdh1Q8CGV4 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
Rdh1Q8CGV4 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rdh1Q8CGV4 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.5■□□□□ 0.39
Rdh1Q8CGV4 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rdh1Q8CGV4 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rdh1Q8CGV4 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rdh1Q8CGV4 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
Rdh1Q8CGV4 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rdh1Q8CGV4 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rdh1Q8CGV4 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rdh1Q8CGV4 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rdh1Q8CGV4 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rdh1Q8CGV4 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rdh1Q8CGV4 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Rdh1Q8CGV4 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Rdh1Q8CGV4 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.49■□□□□ 0.39
Rdh1Q8CGV4 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Rdh1Q8CGV4 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Rdh1Q8CGV4 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.49■□□□□ 0.39
Rdh1Q8CGV4 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.49■□□□□ 0.39
Rdh1Q8CGV4 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rdh1Q8CGV4 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Rdh1Q8CGV4 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.48■□□□□ 0.39
Rdh1Q8CGV4 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.48■□□□□ 0.39
Rdh1Q8CGV4 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rdh1Q8CGV4 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rdh1Q8CGV4 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rdh1Q8CGV4 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rdh1Q8CGV4 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rdh1Q8CGV4 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rdh1Q8CGV4 Mir5122-201ENSMUST00000175004 89 ntBASIC17.48■□□□□ 0.39
Rdh1Q8CGV4 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.48■□□□□ 0.39
Rdh1Q8CGV4 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rdh1Q8CGV4 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rdh1Q8CGV4 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rdh1Q8CGV4 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Rdh1Q8CGV4 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rdh1Q8CGV4 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rdh1Q8CGV4 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rdh1Q8CGV4 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rdh1Q8CGV4 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Rdh1Q8CGV4 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rdh1Q8CGV4 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.47■□□□□ 0.39
Rdh1Q8CGV4 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rdh1Q8CGV4 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rdh1Q8CGV4 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rdh1Q8CGV4 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.47■□□□□ 0.39
Rdh1Q8CGV4 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rdh1Q8CGV4 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rdh1Q8CGV4 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rdh1Q8CGV4 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rdh1Q8CGV4 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.47■□□□□ 0.39
Rdh1Q8CGV4 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rdh1Q8CGV4 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rdh1Q8CGV4 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rdh1Q8CGV4 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rdh1Q8CGV4 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rdh1Q8CGV4 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rdh1Q8CGV4 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rdh1Q8CGV4 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Rdh1Q8CGV4 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rdh1Q8CGV4 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.46■□□□□ 0.39
Rdh1Q8CGV4 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.46■□□□□ 0.39
Rdh1Q8CGV4 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rdh1Q8CGV4 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.46■□□□□ 0.39
Rdh1Q8CGV4 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rdh1Q8CGV4 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rdh1Q8CGV4 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rdh1Q8CGV4 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.46■□□□□ 0.39
Rdh1Q8CGV4 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Rdh1Q8CGV4 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.45■□□□□ 0.38
Rdh1Q8CGV4 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.45■□□□□ 0.38
Rdh1Q8CGV4 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rdh1Q8CGV4 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rdh1Q8CGV4 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rdh1Q8CGV4 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rdh1Q8CGV4 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rdh1Q8CGV4 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rdh1Q8CGV4 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.45■□□□□ 0.38
Rdh1Q8CGV4 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rdh1Q8CGV4 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rdh1Q8CGV4 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rdh1Q8CGV4 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rdh1Q8CGV4 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rdh1Q8CGV4 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Rdh1Q8CGV4 Tgds-204ENSMUST00000228543 1594 ntBASIC17.45■□□□□ 0.38
Rdh1Q8CGV4 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.44■□□□□ 0.38
Rdh1Q8CGV4 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rdh1Q8CGV4 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rdh1Q8CGV4 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rdh1Q8CGV4 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rdh1Q8CGV4 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rdh1Q8CGV4 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms