Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc46a2Q8CA03 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc46a2Q8CA03 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.31■□□□□ 0.36
Slc46a2Q8CA03 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc46a2Q8CA03 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc46a2Q8CA03 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Slc46a2Q8CA03 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc46a2Q8CA03 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc46a2Q8CA03 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc46a2Q8CA03 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Slc46a2Q8CA03 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.3■□□□□ 0.36
Slc46a2Q8CA03 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Slc46a2Q8CA03 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc46a2Q8CA03 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.3■□□□□ 0.36
Slc46a2Q8CA03 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Slc46a2Q8CA03 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc46a2Q8CA03 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Slc46a2Q8CA03 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc46a2Q8CA03 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc46a2Q8CA03 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Slc46a2Q8CA03 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc46a2Q8CA03 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.3■□□□□ 0.36
Slc46a2Q8CA03 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.29■□□□□ 0.36
Slc46a2Q8CA03 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc46a2Q8CA03 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc46a2Q8CA03 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc46a2Q8CA03 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc46a2Q8CA03 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc46a2Q8CA03 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc46a2Q8CA03 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.29■□□□□ 0.36
Slc46a2Q8CA03 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Slc46a2Q8CA03 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Slc46a2Q8CA03 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Slc46a2Q8CA03 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc46a2Q8CA03 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc46a2Q8CA03 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc46a2Q8CA03 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
Slc46a2Q8CA03 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
Slc46a2Q8CA03 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.28■□□□□ 0.36
Slc46a2Q8CA03 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.28■□□□□ 0.36
Slc46a2Q8CA03 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.28■□□□□ 0.36
Slc46a2Q8CA03 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.28■□□□□ 0.36
Slc46a2Q8CA03 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc46a2Q8CA03 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc46a2Q8CA03 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Slc46a2Q8CA03 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.28■□□□□ 0.36
Slc46a2Q8CA03 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc46a2Q8CA03 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Slc46a2Q8CA03 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc46a2Q8CA03 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.28■□□□□ 0.36
Slc46a2Q8CA03 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slc46a2Q8CA03 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.27■□□□□ 0.36
Slc46a2Q8CA03 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slc46a2Q8CA03 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Slc46a2Q8CA03 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slc46a2Q8CA03 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slc46a2Q8CA03 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slc46a2Q8CA03 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slc46a2Q8CA03 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.27■□□□□ 0.36
Slc46a2Q8CA03 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slc46a2Q8CA03 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slc46a2Q8CA03 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.27■□□□□ 0.36
Slc46a2Q8CA03 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Slc46a2Q8CA03 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slc46a2Q8CA03 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Slc46a2Q8CA03 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slc46a2Q8CA03 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Slc46a2Q8CA03 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Slc46a2Q8CA03 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Slc46a2Q8CA03 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Slc46a2Q8CA03 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Slc46a2Q8CA03 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Slc46a2Q8CA03 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.27■□□□□ 0.35
Slc46a2Q8CA03 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Slc46a2Q8CA03 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Slc46a2Q8CA03 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.26■□□□□ 0.35
Slc46a2Q8CA03 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc46a2Q8CA03 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc46a2Q8CA03 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc46a2Q8CA03 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc46a2Q8CA03 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc46a2Q8CA03 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Slc46a2Q8CA03 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.26■□□□□ 0.35
Slc46a2Q8CA03 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc46a2Q8CA03 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc46a2Q8CA03 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc46a2Q8CA03 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Slc46a2Q8CA03 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.26■□□□□ 0.35
Slc46a2Q8CA03 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.26■□□□□ 0.35
Slc46a2Q8CA03 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Slc46a2Q8CA03 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Slc46a2Q8CA03 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc46a2Q8CA03 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.26■□□□□ 0.35
Slc46a2Q8CA03 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Slc46a2Q8CA03 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc46a2Q8CA03 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc46a2Q8CA03 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc46a2Q8CA03 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc46a2Q8CA03 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.25■□□□□ 0.35
Slc46a2Q8CA03 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms