Protein–RNA interactions for Protein: Q8C7N7

Aph1b, Gamma-secretase subunit APH-1B, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aph1bQ8C7N7 Gm42642-201ENSMUST00000200683 355 ntBASIC17.82■□□□□ 0.44
Aph1bQ8C7N7 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Aph1bQ8C7N7 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Aph1bQ8C7N7 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Aph1bQ8C7N7 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Aph1bQ8C7N7 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Aph1bQ8C7N7 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Aph1bQ8C7N7 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Aph1bQ8C7N7 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Aph1bQ8C7N7 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Aph1bQ8C7N7 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Aph1bQ8C7N7 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Aph1bQ8C7N7 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.81■□□□□ 0.44
Aph1bQ8C7N7 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Aph1bQ8C7N7 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.81■□□□□ 0.44
Aph1bQ8C7N7 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Aph1bQ8C7N7 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
Aph1bQ8C7N7 Gm18671-201ENSMUST00000214826 683 ntBASIC17.81■□□□□ 0.44
Aph1bQ8C7N7 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Aph1bQ8C7N7 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Aph1bQ8C7N7 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.81■□□□□ 0.44
Aph1bQ8C7N7 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Aph1bQ8C7N7 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Aph1bQ8C7N7 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Aph1bQ8C7N7 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Aph1bQ8C7N7 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Aph1bQ8C7N7 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Aph1bQ8C7N7 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Aph1bQ8C7N7 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.8■□□□□ 0.44
Aph1bQ8C7N7 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Aph1bQ8C7N7 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.8■□□□□ 0.44
Aph1bQ8C7N7 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Aph1bQ8C7N7 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Aph1bQ8C7N7 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Aph1bQ8C7N7 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Aph1bQ8C7N7 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.79■□□□□ 0.44
Aph1bQ8C7N7 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Aph1bQ8C7N7 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Aph1bQ8C7N7 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Aph1bQ8C7N7 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Aph1bQ8C7N7 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Aph1bQ8C7N7 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Aph1bQ8C7N7 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Aph1bQ8C7N7 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Aph1bQ8C7N7 AV356131-201ENSMUST00000206201 750 ntBASIC17.79■□□□□ 0.44
Aph1bQ8C7N7 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.79■□□□□ 0.44
Aph1bQ8C7N7 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.79■□□□□ 0.44
Aph1bQ8C7N7 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Aph1bQ8C7N7 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Aph1bQ8C7N7 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Aph1bQ8C7N7 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Aph1bQ8C7N7 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Aph1bQ8C7N7 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Aph1bQ8C7N7 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.78■□□□□ 0.44
Aph1bQ8C7N7 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.78■□□□□ 0.44
Aph1bQ8C7N7 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Aph1bQ8C7N7 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Aph1bQ8C7N7 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Aph1bQ8C7N7 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Aph1bQ8C7N7 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Aph1bQ8C7N7 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Aph1bQ8C7N7 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Aph1bQ8C7N7 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Aph1bQ8C7N7 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Aph1bQ8C7N7 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.77■□□□□ 0.44
Aph1bQ8C7N7 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Aph1bQ8C7N7 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.77■□□□□ 0.44
Aph1bQ8C7N7 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Aph1bQ8C7N7 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Aph1bQ8C7N7 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.77■□□□□ 0.44
Aph1bQ8C7N7 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Aph1bQ8C7N7 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Aph1bQ8C7N7 Gm5874-201ENSMUST00000096101 508 ntBASIC17.77■□□□□ 0.44
Aph1bQ8C7N7 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.77■□□□□ 0.44
Aph1bQ8C7N7 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Aph1bQ8C7N7 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Aph1bQ8C7N7 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Aph1bQ8C7N7 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.77■□□□□ 0.43
Aph1bQ8C7N7 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Aph1bQ8C7N7 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Aph1bQ8C7N7 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Aph1bQ8C7N7 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Aph1bQ8C7N7 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Aph1bQ8C7N7 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Aph1bQ8C7N7 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Aph1bQ8C7N7 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.76■□□□□ 0.43
Aph1bQ8C7N7 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Aph1bQ8C7N7 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Aph1bQ8C7N7 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.76■□□□□ 0.43
Aph1bQ8C7N7 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.76■□□□□ 0.43
Aph1bQ8C7N7 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Aph1bQ8C7N7 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.76■□□□□ 0.43
Aph1bQ8C7N7 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.76■□□□□ 0.43
Aph1bQ8C7N7 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Aph1bQ8C7N7 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Aph1bQ8C7N7 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Aph1bQ8C7N7 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Aph1bQ8C7N7 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Aph1bQ8C7N7 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Aph1bQ8C7N7 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms