Protein–RNA interactions for Protein: Q8BUP8

Fam43a, Protein FAM43A, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam43aQ8BUP8 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.99■□□□□ 0.79
Fam43aQ8BUP8 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Fam43aQ8BUP8 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Fam43aQ8BUP8 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.99■□□□□ 0.79
Fam43aQ8BUP8 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Fam43aQ8BUP8 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Fam43aQ8BUP8 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Fam43aQ8BUP8 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Fam43aQ8BUP8 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Fam43aQ8BUP8 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Fam43aQ8BUP8 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Fam43aQ8BUP8 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Fam43aQ8BUP8 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Fam43aQ8BUP8 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Fam43aQ8BUP8 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.98■□□□□ 0.79
Fam43aQ8BUP8 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Fam43aQ8BUP8 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.98■□□□□ 0.79
Fam43aQ8BUP8 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Fam43aQ8BUP8 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Fam43aQ8BUP8 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Fam43aQ8BUP8 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Fam43aQ8BUP8 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.98■□□□□ 0.79
Fam43aQ8BUP8 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Fam43aQ8BUP8 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Fam43aQ8BUP8 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Fam43aQ8BUP8 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Fam43aQ8BUP8 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Fam43aQ8BUP8 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Fam43aQ8BUP8 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Fam43aQ8BUP8 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
Fam43aQ8BUP8 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Fam43aQ8BUP8 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.97■□□□□ 0.79
Fam43aQ8BUP8 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Fam43aQ8BUP8 Gm26571-201ENSMUST00000181399 666 ntBASIC19.97■□□□□ 0.79
Fam43aQ8BUP8 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Fam43aQ8BUP8 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Fam43aQ8BUP8 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Fam43aQ8BUP8 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Fam43aQ8BUP8 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Fam43aQ8BUP8 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Fam43aQ8BUP8 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Fam43aQ8BUP8 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.97■□□□□ 0.79
Fam43aQ8BUP8 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Fam43aQ8BUP8 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Fam43aQ8BUP8 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Fam43aQ8BUP8 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Fam43aQ8BUP8 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Fam43aQ8BUP8 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
Fam43aQ8BUP8 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Fam43aQ8BUP8 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Fam43aQ8BUP8 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Fam43aQ8BUP8 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Fam43aQ8BUP8 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Fam43aQ8BUP8 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
Fam43aQ8BUP8 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Fam43aQ8BUP8 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.96■□□□□ 0.79
Fam43aQ8BUP8 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Fam43aQ8BUP8 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Fam43aQ8BUP8 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Fam43aQ8BUP8 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.96■□□□□ 0.79
Fam43aQ8BUP8 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Fam43aQ8BUP8 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Fam43aQ8BUP8 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Fam43aQ8BUP8 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Fam43aQ8BUP8 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Fam43aQ8BUP8 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Fam43aQ8BUP8 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Fam43aQ8BUP8 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Fam43aQ8BUP8 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Fam43aQ8BUP8 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.95■□□□□ 0.78
Fam43aQ8BUP8 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.95■□□□□ 0.78
Fam43aQ8BUP8 Gm42642-201ENSMUST00000200683 355 ntBASIC19.95■□□□□ 0.78
Fam43aQ8BUP8 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Fam43aQ8BUP8 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Fam43aQ8BUP8 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Fam43aQ8BUP8 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.95■□□□□ 0.78
Fam43aQ8BUP8 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Fam43aQ8BUP8 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Fam43aQ8BUP8 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Fam43aQ8BUP8 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Fam43aQ8BUP8 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Fam43aQ8BUP8 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Fam43aQ8BUP8 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Fam43aQ8BUP8 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
Fam43aQ8BUP8 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Fam43aQ8BUP8 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Fam43aQ8BUP8 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Fam43aQ8BUP8 Gm42778-201ENSMUST00000199644 553 ntBASIC19.94■□□□□ 0.78
Fam43aQ8BUP8 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Fam43aQ8BUP8 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Fam43aQ8BUP8 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Fam43aQ8BUP8 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Fam43aQ8BUP8 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Fam43aQ8BUP8 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Fam43aQ8BUP8 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Fam43aQ8BUP8 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.93■□□□□ 0.78
Fam43aQ8BUP8 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Fam43aQ8BUP8 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Fam43aQ8BUP8 Gm13234-201ENSMUST00000120010 747 ntBASIC19.93■□□□□ 0.78
Fam43aQ8BUP8 Gm8495-201ENSMUST00000188740 694 ntBASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms