Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Cpsf7Q8BTV2 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cpsf7Q8BTV2 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cpsf7Q8BTV2 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Cpsf7Q8BTV2 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cpsf7Q8BTV2 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cpsf7Q8BTV2 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cpsf7Q8BTV2 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Cpsf7Q8BTV2 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.02■□□□□ 0.48
Cpsf7Q8BTV2 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Cpsf7Q8BTV2 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.02■□□□□ 0.48
Cpsf7Q8BTV2 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cpsf7Q8BTV2 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Cpsf7Q8BTV2 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Cpsf7Q8BTV2 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Cpsf7Q8BTV2 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Cpsf7Q8BTV2 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Cpsf7Q8BTV2 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cpsf7Q8BTV2 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.02■□□□□ 0.47
Cpsf7Q8BTV2 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.47
Cpsf7Q8BTV2 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.02■□□□□ 0.47
Cpsf7Q8BTV2 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.02■□□□□ 0.47
Cpsf7Q8BTV2 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cpsf7Q8BTV2 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cpsf7Q8BTV2 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cpsf7Q8BTV2 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cpsf7Q8BTV2 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.01■□□□□ 0.47
Cpsf7Q8BTV2 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cpsf7Q8BTV2 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cpsf7Q8BTV2 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cpsf7Q8BTV2 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cpsf7Q8BTV2 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.01■□□□□ 0.47
Cpsf7Q8BTV2 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
Cpsf7Q8BTV2 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cpsf7Q8BTV2 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.01■□□□□ 0.47
Cpsf7Q8BTV2 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cpsf7Q8BTV2 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cpsf7Q8BTV2 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.01■□□□□ 0.47
Cpsf7Q8BTV2 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cpsf7Q8BTV2 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.01■□□□□ 0.47
Cpsf7Q8BTV2 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cpsf7Q8BTV2 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.01■□□□□ 0.47
Cpsf7Q8BTV2 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cpsf7Q8BTV2 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Cpsf7Q8BTV2 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cpsf7Q8BTV2 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18■□□□□ 0.47
Cpsf7Q8BTV2 Gm8495-201ENSMUST00000188740 694 ntBASIC18■□□□□ 0.47
Cpsf7Q8BTV2 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cpsf7Q8BTV2 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18■□□□□ 0.47
Cpsf7Q8BTV2 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cpsf7Q8BTV2 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cpsf7Q8BTV2 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Cpsf7Q8BTV2 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cpsf7Q8BTV2 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Cpsf7Q8BTV2 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18■□□□□ 0.47
Cpsf7Q8BTV2 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18■□□□□ 0.47
Cpsf7Q8BTV2 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cpsf7Q8BTV2 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cpsf7Q8BTV2 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cpsf7Q8BTV2 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cpsf7Q8BTV2 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cpsf7Q8BTV2 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cpsf7Q8BTV2 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cpsf7Q8BTV2 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cpsf7Q8BTV2 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.99■□□□□ 0.47
Cpsf7Q8BTV2 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Cpsf7Q8BTV2 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cpsf7Q8BTV2 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.99■□□□□ 0.47
Cpsf7Q8BTV2 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.99■□□□□ 0.47
Cpsf7Q8BTV2 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.99■□□□□ 0.47
Cpsf7Q8BTV2 Gm40848-201ENSMUST00000221998 324 ntBASIC17.99■□□□□ 0.47
Cpsf7Q8BTV2 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cpsf7Q8BTV2 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cpsf7Q8BTV2 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cpsf7Q8BTV2 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.99■□□□□ 0.47
Cpsf7Q8BTV2 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cpsf7Q8BTV2 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cpsf7Q8BTV2 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cpsf7Q8BTV2 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cpsf7Q8BTV2 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Cpsf7Q8BTV2 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.98■□□□□ 0.47
Cpsf7Q8BTV2 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.98■□□□□ 0.47
Cpsf7Q8BTV2 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Cpsf7Q8BTV2 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.98■□□□□ 0.47
Cpsf7Q8BTV2 Gm18284-201ENSMUST00000172604 624 ntBASIC17.98■□□□□ 0.47
Cpsf7Q8BTV2 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cpsf7Q8BTV2 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.98■□□□□ 0.47
Cpsf7Q8BTV2 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cpsf7Q8BTV2 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.98■□□□□ 0.47
Cpsf7Q8BTV2 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Cpsf7Q8BTV2 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cpsf7Q8BTV2 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cpsf7Q8BTV2 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.98■□□□□ 0.47
Cpsf7Q8BTV2 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cpsf7Q8BTV2 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cpsf7Q8BTV2 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cpsf7Q8BTV2 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cpsf7Q8BTV2 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Cpsf7Q8BTV2 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cpsf7Q8BTV2 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms