Protein–RNA interactions for Protein: Q8BTF7

Lig4, DNA ligase 4, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4Q8BTF7 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Lig4Q8BTF7 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lig4Q8BTF7 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lig4Q8BTF7 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lig4Q8BTF7 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Lig4Q8BTF7 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.05■□□□□ 0.64
Lig4Q8BTF7 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lig4Q8BTF7 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Lig4Q8BTF7 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Lig4Q8BTF7 Gm10698-201ENSMUST00000182663 604 ntBASIC19.05■□□□□ 0.64
Lig4Q8BTF7 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Lig4Q8BTF7 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lig4Q8BTF7 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Lig4Q8BTF7 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lig4Q8BTF7 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
Lig4Q8BTF7 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Lig4Q8BTF7 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lig4Q8BTF7 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Lig4Q8BTF7 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lig4Q8BTF7 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lig4Q8BTF7 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Lig4Q8BTF7 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.04■□□□□ 0.64
Lig4Q8BTF7 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Lig4Q8BTF7 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lig4Q8BTF7 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lig4Q8BTF7 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lig4Q8BTF7 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lig4Q8BTF7 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lig4Q8BTF7 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lig4Q8BTF7 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.03■□□□□ 0.64
Lig4Q8BTF7 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lig4Q8BTF7 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lig4Q8BTF7 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lig4Q8BTF7 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Lig4Q8BTF7 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.03■□□□□ 0.64
Lig4Q8BTF7 Gm15375-201ENSMUST00000119510 849 ntBASIC19.03■□□□□ 0.64
Lig4Q8BTF7 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
Lig4Q8BTF7 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lig4Q8BTF7 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lig4Q8BTF7 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Lig4Q8BTF7 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lig4Q8BTF7 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lig4Q8BTF7 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lig4Q8BTF7 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lig4Q8BTF7 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lig4Q8BTF7 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lig4Q8BTF7 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC19.02■□□□□ 0.64
Lig4Q8BTF7 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lig4Q8BTF7 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC19.02■□□□□ 0.64
Lig4Q8BTF7 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lig4Q8BTF7 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Lig4Q8BTF7 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lig4Q8BTF7 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Lig4Q8BTF7 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.02■□□□□ 0.64
Lig4Q8BTF7 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lig4Q8BTF7 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
Lig4Q8BTF7 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Lig4Q8BTF7 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.02■□□□□ 0.63
Lig4Q8BTF7 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.63
Lig4Q8BTF7 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Lig4Q8BTF7 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Lig4Q8BTF7 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lig4Q8BTF7 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lig4Q8BTF7 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC19.01■□□□□ 0.63
Lig4Q8BTF7 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Lig4Q8BTF7 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lig4Q8BTF7 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Lig4Q8BTF7 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lig4Q8BTF7 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lig4Q8BTF7 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lig4Q8BTF7 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lig4Q8BTF7 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lig4Q8BTF7 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lig4Q8BTF7 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Lig4Q8BTF7 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19■□□□□ 0.63
Lig4Q8BTF7 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Lig4Q8BTF7 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lig4Q8BTF7 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lig4Q8BTF7 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19■□□□□ 0.63
Lig4Q8BTF7 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19■□□□□ 0.63
Lig4Q8BTF7 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC19■□□□□ 0.63
Lig4Q8BTF7 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC19■□□□□ 0.63
Lig4Q8BTF7 Gm45560-201ENSMUST00000211492 1472 ntBASIC19■□□□□ 0.63
Lig4Q8BTF7 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Lig4Q8BTF7 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Lig4Q8BTF7 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lig4Q8BTF7 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lig4Q8BTF7 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Lig4Q8BTF7 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lig4Q8BTF7 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Lig4Q8BTF7 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lig4Q8BTF7 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lig4Q8BTF7 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lig4Q8BTF7 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Lig4Q8BTF7 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lig4Q8BTF7 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lig4Q8BTF7 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lig4Q8BTF7 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Lig4Q8BTF7 Mir6349-201ENSMUST00000184059 97 ntBASIC18.99■□□□□ 0.63
Lig4Q8BTF7 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms