Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rd3Q8BRE0 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rd3Q8BRE0 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Rd3Q8BRE0 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rd3Q8BRE0 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rd3Q8BRE0 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rd3Q8BRE0 Gm7712-202ENSMUST00000222331 1510 ntBASIC19.12■□□□□ 0.65
Rd3Q8BRE0 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rd3Q8BRE0 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Rd3Q8BRE0 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.12■□□□□ 0.65
Rd3Q8BRE0 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC19.12■□□□□ 0.65
Rd3Q8BRE0 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC19.12■□□□□ 0.65
Rd3Q8BRE0 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rd3Q8BRE0 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rd3Q8BRE0 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rd3Q8BRE0 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rd3Q8BRE0 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rd3Q8BRE0 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Rd3Q8BRE0 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.12■□□□□ 0.65
Rd3Q8BRE0 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rd3Q8BRE0 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rd3Q8BRE0 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
Rd3Q8BRE0 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rd3Q8BRE0 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rd3Q8BRE0 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC19.11■□□□□ 0.65
Rd3Q8BRE0 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rd3Q8BRE0 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rd3Q8BRE0 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rd3Q8BRE0 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Rd3Q8BRE0 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.1■□□□□ 0.65
Rd3Q8BRE0 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.1■□□□□ 0.65
Rd3Q8BRE0 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rd3Q8BRE0 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rd3Q8BRE0 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rd3Q8BRE0 Gm10231-201ENSMUST00000181584 441 ntBASIC19.1■□□□□ 0.65
Rd3Q8BRE0 Mir6349-201ENSMUST00000184059 97 ntBASIC19.1■□□□□ 0.65
Rd3Q8BRE0 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rd3Q8BRE0 Gm21814-202ENSMUST00000203277 873 ntBASIC19.1■□□□□ 0.65
Rd3Q8BRE0 Gm10175-202ENSMUST00000208752 441 ntBASIC19.1■□□□□ 0.65
Rd3Q8BRE0 Otx2os1-204ENSMUST00000227221 751 ntBASIC19.1■□□□□ 0.65
Rd3Q8BRE0 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rd3Q8BRE0 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rd3Q8BRE0 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.1■□□□□ 0.65
Rd3Q8BRE0 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rd3Q8BRE0 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Rd3Q8BRE0 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rd3Q8BRE0 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rd3Q8BRE0 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Rd3Q8BRE0 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.09■□□□□ 0.65
Rd3Q8BRE0 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Rd3Q8BRE0 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rd3Q8BRE0 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Rd3Q8BRE0 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rd3Q8BRE0 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rd3Q8BRE0 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Rd3Q8BRE0 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rd3Q8BRE0 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rd3Q8BRE0 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rd3Q8BRE0 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Rd3Q8BRE0 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rd3Q8BRE0 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Rd3Q8BRE0 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Rd3Q8BRE0 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Rd3Q8BRE0 Timm23-208ENSMUST00000226683 750 ntBASIC19.08■□□□□ 0.64
Rd3Q8BRE0 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Rd3Q8BRE0 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rd3Q8BRE0 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rd3Q8BRE0 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rd3Q8BRE0 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rd3Q8BRE0 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rd3Q8BRE0 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rd3Q8BRE0 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rd3Q8BRE0 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.64
Rd3Q8BRE0 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rd3Q8BRE0 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rd3Q8BRE0 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Rd3Q8BRE0 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rd3Q8BRE0 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rd3Q8BRE0 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Rd3Q8BRE0 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.07■□□□□ 0.64
Rd3Q8BRE0 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC19.07■□□□□ 0.64
Rd3Q8BRE0 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC19.07■□□□□ 0.64
Rd3Q8BRE0 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rd3Q8BRE0 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC19.07■□□□□ 0.64
Rd3Q8BRE0 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rd3Q8BRE0 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rd3Q8BRE0 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rd3Q8BRE0 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rd3Q8BRE0 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rd3Q8BRE0 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rd3Q8BRE0 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rd3Q8BRE0 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rd3Q8BRE0 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.07■□□□□ 0.64
Rd3Q8BRE0 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Rd3Q8BRE0 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rd3Q8BRE0 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rd3Q8BRE0 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rd3Q8BRE0 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rd3Q8BRE0 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rd3Q8BRE0 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms