Protein–RNA interactions for Protein: Q8BM39

Prpf18, Pre-mRNA-splicing factor 18, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf18Q8BM39 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf18Q8BM39 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Prpf18Q8BM39 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Prpf18Q8BM39 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf18Q8BM39 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf18Q8BM39 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf18Q8BM39 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf18Q8BM39 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Prpf18Q8BM39 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf18Q8BM39 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf18Q8BM39 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf18Q8BM39 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf18Q8BM39 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf18Q8BM39 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf18Q8BM39 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf18Q8BM39 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf18Q8BM39 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Prpf18Q8BM39 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Prpf18Q8BM39 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf18Q8BM39 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf18Q8BM39 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf18Q8BM39 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf18Q8BM39 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf18Q8BM39 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Prpf18Q8BM39 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf18Q8BM39 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf18Q8BM39 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf18Q8BM39 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.11■□□□□ 0.33
Prpf18Q8BM39 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf18Q8BM39 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.11■□□□□ 0.33
Prpf18Q8BM39 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
Prpf18Q8BM39 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf18Q8BM39 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prpf18Q8BM39 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prpf18Q8BM39 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Prpf18Q8BM39 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Prpf18Q8BM39 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prpf18Q8BM39 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.1■□□□□ 0.33
Prpf18Q8BM39 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.1■□□□□ 0.33
Prpf18Q8BM39 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prpf18Q8BM39 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prpf18Q8BM39 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.1■□□□□ 0.33
Prpf18Q8BM39 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prpf18Q8BM39 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prpf18Q8BM39 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prpf18Q8BM39 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prpf18Q8BM39 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.09■□□□□ 0.33
Prpf18Q8BM39 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prpf18Q8BM39 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prpf18Q8BM39 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prpf18Q8BM39 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prpf18Q8BM39 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Prpf18Q8BM39 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Prpf18Q8BM39 Gm40848-201ENSMUST00000221998 324 ntBASIC17.09■□□□□ 0.33
Prpf18Q8BM39 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prpf18Q8BM39 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prpf18Q8BM39 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Prpf18Q8BM39 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Prpf18Q8BM39 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prpf18Q8BM39 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prpf18Q8BM39 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Prpf18Q8BM39 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prpf18Q8BM39 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Prpf18Q8BM39 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prpf18Q8BM39 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
Prpf18Q8BM39 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
Prpf18Q8BM39 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Prpf18Q8BM39 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Prpf18Q8BM39 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Prpf18Q8BM39 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Prpf18Q8BM39 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Prpf18Q8BM39 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Prpf18Q8BM39 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prpf18Q8BM39 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Prpf18Q8BM39 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Prpf18Q8BM39 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Prpf18Q8BM39 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.08■□□□□ 0.32
Prpf18Q8BM39 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC17.08■□□□□ 0.32
Prpf18Q8BM39 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prpf18Q8BM39 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prpf18Q8BM39 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Prpf18Q8BM39 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prpf18Q8BM39 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Prpf18Q8BM39 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prpf18Q8BM39 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prpf18Q8BM39 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Prpf18Q8BM39 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prpf18Q8BM39 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prpf18Q8BM39 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prpf18Q8BM39 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.07■□□□□ 0.32
Prpf18Q8BM39 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf18Q8BM39 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.07■□□□□ 0.32
Prpf18Q8BM39 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf18Q8BM39 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf18Q8BM39 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Prpf18Q8BM39 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.07■□□□□ 0.32
Prpf18Q8BM39 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf18Q8BM39 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf18Q8BM39 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prpf18Q8BM39 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms