Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn3bQ8BHK2 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn3bQ8BHK2 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn3bQ8BHK2 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
Scn3bQ8BHK2 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn3bQ8BHK2 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Scn3bQ8BHK2 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn3bQ8BHK2 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Scn3bQ8BHK2 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.78■□□□□ 0.28
Scn3bQ8BHK2 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scn3bQ8BHK2 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scn3bQ8BHK2 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.77■□□□□ 0.28
Scn3bQ8BHK2 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scn3bQ8BHK2 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Scn3bQ8BHK2 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scn3bQ8BHK2 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scn3bQ8BHK2 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.77■□□□□ 0.28
Scn3bQ8BHK2 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.77■□□□□ 0.28
Scn3bQ8BHK2 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Scn3bQ8BHK2 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Scn3bQ8BHK2 Gm15546-201ENSMUST00000122095 826 ntBASIC16.77■□□□□ 0.28
Scn3bQ8BHK2 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC16.77■□□□□ 0.28
Scn3bQ8BHK2 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC16.77■□□□□ 0.28
Scn3bQ8BHK2 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC16.77■□□□□ 0.28
Scn3bQ8BHK2 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.77■□□□□ 0.28
Scn3bQ8BHK2 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scn3bQ8BHK2 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scn3bQ8BHK2 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scn3bQ8BHK2 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scn3bQ8BHK2 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scn3bQ8BHK2 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Scn3bQ8BHK2 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Scn3bQ8BHK2 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn3bQ8BHK2 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Scn3bQ8BHK2 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Scn3bQ8BHK2 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Scn3bQ8BHK2 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn3bQ8BHK2 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Scn3bQ8BHK2 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn3bQ8BHK2 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC16.76■□□□□ 0.27
Scn3bQ8BHK2 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn3bQ8BHK2 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Scn3bQ8BHK2 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn3bQ8BHK2 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn3bQ8BHK2 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn3bQ8BHK2 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn3bQ8BHK2 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Scn3bQ8BHK2 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn3bQ8BHK2 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn3bQ8BHK2 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn3bQ8BHK2 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn3bQ8BHK2 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Scn3bQ8BHK2 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn3bQ8BHK2 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Scn3bQ8BHK2 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Scn3bQ8BHK2 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn3bQ8BHK2 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC16.75■□□□□ 0.27
Scn3bQ8BHK2 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC16.75■□□□□ 0.27
Scn3bQ8BHK2 Gm27032-201ENSMUST00000183124 1116 ntBASIC16.75■□□□□ 0.27
Scn3bQ8BHK2 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn3bQ8BHK2 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn3bQ8BHK2 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn3bQ8BHK2 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn3bQ8BHK2 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.75■□□□□ 0.27
Scn3bQ8BHK2 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Scn3bQ8BHK2 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn3bQ8BHK2 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn3bQ8BHK2 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Scn3bQ8BHK2 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn3bQ8BHK2 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn3bQ8BHK2 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC16.74■□□□□ 0.27
Scn3bQ8BHK2 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn3bQ8BHK2 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn3bQ8BHK2 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn3bQ8BHK2 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn3bQ8BHK2 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Scn3bQ8BHK2 Tgds-204ENSMUST00000228543 1594 ntBASIC16.74■□□□□ 0.27
Scn3bQ8BHK2 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Scn3bQ8BHK2 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Scn3bQ8BHK2 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Scn3bQ8BHK2 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn3bQ8BHK2 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn3bQ8BHK2 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn3bQ8BHK2 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Scn3bQ8BHK2 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn3bQ8BHK2 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn3bQ8BHK2 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Scn3bQ8BHK2 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC16.73■□□□□ 0.27
Scn3bQ8BHK2 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn3bQ8BHK2 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn3bQ8BHK2 Gm5812-201ENSMUST00000061073 957 ntBASIC16.73■□□□□ 0.27
Scn3bQ8BHK2 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn3bQ8BHK2 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Scn3bQ8BHK2 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Scn3bQ8BHK2 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn3bQ8BHK2 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Scn3bQ8BHK2 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn3bQ8BHK2 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.73■□□□□ 0.27
Scn3bQ8BHK2 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn3bQ8BHK2 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms