Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Upk3bQ80YF6 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Upk3bQ80YF6 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Upk3bQ80YF6 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Upk3bQ80YF6 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Upk3bQ80YF6 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC15.25■□□□□ 0.03
Upk3bQ80YF6 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Upk3bQ80YF6 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Upk3bQ80YF6 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Upk3bQ80YF6 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC15.25■□□□□ 0.03
Upk3bQ80YF6 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Upk3bQ80YF6 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Upk3bQ80YF6 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Upk3bQ80YF6 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Upk3bQ80YF6 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Upk3bQ80YF6 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Upk3bQ80YF6 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Upk3bQ80YF6 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Upk3bQ80YF6 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Upk3bQ80YF6 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Upk3bQ80YF6 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Upk3bQ80YF6 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Upk3bQ80YF6 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Upk3bQ80YF6 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Upk3bQ80YF6 CT010467.1-202ENSMUST00000205406 714 ntBASIC15.24■□□□□ 0.03
Upk3bQ80YF6 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Upk3bQ80YF6 Gm6139-201ENSMUST00000079261 882 ntBASIC15.24■□□□□ 0.03
Upk3bQ80YF6 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC15.24■□□□□ 0.03
Upk3bQ80YF6 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC15.24■□□□□ 0.03
Upk3bQ80YF6 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Upk3bQ80YF6 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC15.24■□□□□ 0.03
Upk3bQ80YF6 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Upk3bQ80YF6 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Upk3bQ80YF6 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Upk3bQ80YF6 Zcchc6-207ENSMUST00000225576 2499 ntBASIC15.23■□□□□ 0.03
Upk3bQ80YF6 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Upk3bQ80YF6 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Upk3bQ80YF6 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Upk3bQ80YF6 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Upk3bQ80YF6 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Upk3bQ80YF6 Appbp2os-202ENSMUST00000206972 447 ntBASIC15.23■□□□□ 0.03
Upk3bQ80YF6 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Upk3bQ80YF6 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Upk3bQ80YF6 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Upk3bQ80YF6 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Upk3bQ80YF6 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Upk3bQ80YF6 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Upk3bQ80YF6 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Upk3bQ80YF6 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Upk3bQ80YF6 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
Upk3bQ80YF6 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Upk3bQ80YF6 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
Upk3bQ80YF6 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC15.22■□□□□ 0.03
Upk3bQ80YF6 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Upk3bQ80YF6 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Upk3bQ80YF6 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC15.22■□□□□ 0.03
Upk3bQ80YF6 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Upk3bQ80YF6 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Upk3bQ80YF6 AC160393.1-201ENSMUST00000218378 1279 ntBASIC15.22■□□□□ 0.03
Upk3bQ80YF6 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC15.22■□□□□ 0.03
Upk3bQ80YF6 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Upk3bQ80YF6 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Upk3bQ80YF6 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Upk3bQ80YF6 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Upk3bQ80YF6 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Upk3bQ80YF6 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Upk3bQ80YF6 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Upk3bQ80YF6 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Upk3bQ80YF6 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Upk3bQ80YF6 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Upk3bQ80YF6 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Upk3bQ80YF6 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Upk3bQ80YF6 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Upk3bQ80YF6 Gm27454-201ENSMUST00000185090 204 ntBASIC15.21■□□□□ 0.03
Upk3bQ80YF6 Cdc34b-202ENSMUST00000188741 1252 ntBASIC15.21■□□□□ 0.03
Upk3bQ80YF6 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC15.21■□□□□ 0.03
Upk3bQ80YF6 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Upk3bQ80YF6 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Upk3bQ80YF6 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Upk3bQ80YF6 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Upk3bQ80YF6 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Upk3bQ80YF6 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Upk3bQ80YF6 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC15.21■□□□□ 0.02
Upk3bQ80YF6 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC15.21■□□□□ 0.02
Upk3bQ80YF6 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC15.2■□□□□ 0.02
Upk3bQ80YF6 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Upk3bQ80YF6 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Upk3bQ80YF6 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Upk3bQ80YF6 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Upk3bQ80YF6 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Upk3bQ80YF6 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Upk3bQ80YF6 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Upk3bQ80YF6 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Upk3bQ80YF6 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Upk3bQ80YF6 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Upk3bQ80YF6 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Upk3bQ80YF6 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Upk3bQ80YF6 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Upk3bQ80YF6 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Upk3bQ80YF6 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms