Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Gm10602-201ENSMUST00000098239 609 ntBASIC17.39■□□□□ 0.37
Trim36Q80WG7 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim36Q80WG7 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim36Q80WG7 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim36Q80WG7 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim36Q80WG7 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim36Q80WG7 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.39■□□□□ 0.37
Trim36Q80WG7 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim36Q80WG7 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim36Q80WG7 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim36Q80WG7 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim36Q80WG7 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim36Q80WG7 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trim36Q80WG7 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Trim36Q80WG7 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim36Q80WG7 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trim36Q80WG7 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.38■□□□□ 0.37
Trim36Q80WG7 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim36Q80WG7 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim36Q80WG7 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trim36Q80WG7 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trim36Q80WG7 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.38■□□□□ 0.37
Trim36Q80WG7 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.38■□□□□ 0.37
Trim36Q80WG7 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim36Q80WG7 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim36Q80WG7 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trim36Q80WG7 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Trim36Q80WG7 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Trim36Q80WG7 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim36Q80WG7 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim36Q80WG7 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trim36Q80WG7 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.37■□□□□ 0.37
Trim36Q80WG7 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim36Q80WG7 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim36Q80WG7 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trim36Q80WG7 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim36Q80WG7 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim36Q80WG7 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim36Q80WG7 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Trim36Q80WG7 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim36Q80WG7 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trim36Q80WG7 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Trim36Q80WG7 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trim36Q80WG7 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trim36Q80WG7 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim36Q80WG7 Gm12933-201ENSMUST00000120203 872 ntBASIC17.36■□□□□ 0.37
Trim36Q80WG7 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trim36Q80WG7 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim36Q80WG7 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim36Q80WG7 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim36Q80WG7 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.36■□□□□ 0.37
Trim36Q80WG7 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Trim36Q80WG7 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim36Q80WG7 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim36Q80WG7 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim36Q80WG7 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim36Q80WG7 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim36Q80WG7 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim36Q80WG7 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.35■□□□□ 0.37
Trim36Q80WG7 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Trim36Q80WG7 Gm27011-201ENSMUST00000182352 972 ntBASIC17.35■□□□□ 0.37
Trim36Q80WG7 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Trim36Q80WG7 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim36Q80WG7 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.35■□□□□ 0.37
Trim36Q80WG7 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
Trim36Q80WG7 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Trim36Q80WG7 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim36Q80WG7 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim36Q80WG7 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Trim36Q80WG7 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim36Q80WG7 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim36Q80WG7 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim36Q80WG7 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim36Q80WG7 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim36Q80WG7 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim36Q80WG7 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim36Q80WG7 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.34■□□□□ 0.37
Trim36Q80WG7 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.34■□□□□ 0.37
Trim36Q80WG7 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim36Q80WG7 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trim36Q80WG7 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim36Q80WG7 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
Trim36Q80WG7 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim36Q80WG7 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim36Q80WG7 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim36Q80WG7 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim36Q80WG7 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.34■□□□□ 0.37
Trim36Q80WG7 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim36Q80WG7 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
Trim36Q80WG7 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.33■□□□□ 0.37
Trim36Q80WG7 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim36Q80WG7 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim36Q80WG7 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Trim36Q80WG7 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Trim36Q80WG7 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.33■□□□□ 0.37
Trim36Q80WG7 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim36Q80WG7 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trim36Q80WG7 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim36Q80WG7 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.33■□□□□ 0.36
Trim36Q80WG7 Gm13146-201ENSMUST00000118508 780 ntBASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms