Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdh19Q80TF3 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdh19Q80TF3 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh19Q80TF3 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Pcdh19Q80TF3 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh19Q80TF3 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh19Q80TF3 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh19Q80TF3 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh19Q80TF3 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Pcdh19Q80TF3 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh19Q80TF3 Gm15375-201ENSMUST00000119510 849 ntBASIC17.68■□□□□ 0.42
Pcdh19Q80TF3 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh19Q80TF3 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh19Q80TF3 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh19Q80TF3 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.68■□□□□ 0.42
Pcdh19Q80TF3 Mir6982-201ENSMUST00000184354 68 ntBASIC17.68■□□□□ 0.42
Pcdh19Q80TF3 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Pcdh19Q80TF3 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh19Q80TF3 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.68■□□□□ 0.42
Pcdh19Q80TF3 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.68■□□□□ 0.42
Pcdh19Q80TF3 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh19Q80TF3 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh19Q80TF3 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Pcdh19Q80TF3 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh19Q80TF3 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh19Q80TF3 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh19Q80TF3 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdh19Q80TF3 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh19Q80TF3 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh19Q80TF3 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh19Q80TF3 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh19Q80TF3 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh19Q80TF3 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh19Q80TF3 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh19Q80TF3 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.67■□□□□ 0.42
Pcdh19Q80TF3 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh19Q80TF3 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Pcdh19Q80TF3 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.67■□□□□ 0.42
Pcdh19Q80TF3 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh19Q80TF3 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.67■□□□□ 0.42
Pcdh19Q80TF3 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh19Q80TF3 Iqck-206ENSMUST00000208658 2891 ntBASIC17.67■□□□□ 0.42
Pcdh19Q80TF3 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.67■□□□□ 0.42
Pcdh19Q80TF3 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Pcdh19Q80TF3 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh19Q80TF3 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.66■□□□□ 0.42
Pcdh19Q80TF3 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.66■□□□□ 0.42
Pcdh19Q80TF3 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Pcdh19Q80TF3 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh19Q80TF3 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh19Q80TF3 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.66■□□□□ 0.42
Pcdh19Q80TF3 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh19Q80TF3 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh19Q80TF3 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.66■□□□□ 0.42
Pcdh19Q80TF3 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh19Q80TF3 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.66■□□□□ 0.42
Pcdh19Q80TF3 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh19Q80TF3 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh19Q80TF3 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh19Q80TF3 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh19Q80TF3 Mir1199-201ENSMUST00000117015 119 ntBASIC17.65■□□□□ 0.42
Pcdh19Q80TF3 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh19Q80TF3 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh19Q80TF3 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.65■□□□□ 0.42
Pcdh19Q80TF3 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh19Q80TF3 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pcdh19Q80TF3 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh19Q80TF3 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh19Q80TF3 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
Pcdh19Q80TF3 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.64■□□□□ 0.41
Pcdh19Q80TF3 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.64■□□□□ 0.41
Pcdh19Q80TF3 Mir6349-201ENSMUST00000184059 97 ntBASIC17.64■□□□□ 0.41
Pcdh19Q80TF3 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh19Q80TF3 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Pcdh19Q80TF3 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Pcdh19Q80TF3 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
Pcdh19Q80TF3 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.64■□□□□ 0.41
Pcdh19Q80TF3 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.64■□□□□ 0.41
Pcdh19Q80TF3 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.64■□□□□ 0.41
Pcdh19Q80TF3 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh19Q80TF3 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
Pcdh19Q80TF3 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh19Q80TF3 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.63■□□□□ 0.41
Pcdh19Q80TF3 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh19Q80TF3 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh19Q80TF3 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh19Q80TF3 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh19Q80TF3 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh19Q80TF3 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh19Q80TF3 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh19Q80TF3 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.63■□□□□ 0.41
Pcdh19Q80TF3 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh19Q80TF3 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh19Q80TF3 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh19Q80TF3 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh19Q80TF3 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh19Q80TF3 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh19Q80TF3 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Pcdh19Q80TF3 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh19Q80TF3 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms