Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.77■□□□□ 0.6
Prpf38bQ80SY5 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
Prpf38bQ80SY5 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Prpf38bQ80SY5 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.77■□□□□ 0.6
Prpf38bQ80SY5 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.77■□□□□ 0.6
Prpf38bQ80SY5 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Prpf38bQ80SY5 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.77■□□□□ 0.6
Prpf38bQ80SY5 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Prpf38bQ80SY5 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Prpf38bQ80SY5 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.59
Prpf38bQ80SY5 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Prpf38bQ80SY5 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prpf38bQ80SY5 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prpf38bQ80SY5 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prpf38bQ80SY5 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.76■□□□□ 0.59
Prpf38bQ80SY5 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prpf38bQ80SY5 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prpf38bQ80SY5 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prpf38bQ80SY5 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.75■□□□□ 0.59
Prpf38bQ80SY5 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prpf38bQ80SY5 Gm2399-201ENSMUST00000104944 225 ntBASIC18.75■□□□□ 0.59
Prpf38bQ80SY5 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Prpf38bQ80SY5 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Prpf38bQ80SY5 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Prpf38bQ80SY5 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Prpf38bQ80SY5 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prpf38bQ80SY5 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prpf38bQ80SY5 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prpf38bQ80SY5 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
Prpf38bQ80SY5 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.75■□□□□ 0.59
Prpf38bQ80SY5 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prpf38bQ80SY5 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.74■□□□□ 0.59
Prpf38bQ80SY5 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prpf38bQ80SY5 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prpf38bQ80SY5 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prpf38bQ80SY5 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prpf38bQ80SY5 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prpf38bQ80SY5 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prpf38bQ80SY5 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prpf38bQ80SY5 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Prpf38bQ80SY5 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Prpf38bQ80SY5 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Prpf38bQ80SY5 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prpf38bQ80SY5 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Prpf38bQ80SY5 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prpf38bQ80SY5 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Prpf38bQ80SY5 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Prpf38bQ80SY5 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Prpf38bQ80SY5 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Prpf38bQ80SY5 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Prpf38bQ80SY5 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Prpf38bQ80SY5 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Prpf38bQ80SY5 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Prpf38bQ80SY5 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Prpf38bQ80SY5 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Prpf38bQ80SY5 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Prpf38bQ80SY5 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Prpf38bQ80SY5 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Prpf38bQ80SY5 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.73■□□□□ 0.59
Prpf38bQ80SY5 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Prpf38bQ80SY5 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
Prpf38bQ80SY5 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Prpf38bQ80SY5 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
Prpf38bQ80SY5 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Prpf38bQ80SY5 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Prpf38bQ80SY5 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Prpf38bQ80SY5 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Prpf38bQ80SY5 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Prpf38bQ80SY5 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Prpf38bQ80SY5 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Prpf38bQ80SY5 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Prpf38bQ80SY5 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Prpf38bQ80SY5 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC18.72■□□□□ 0.59
Prpf38bQ80SY5 Gm21814-202ENSMUST00000203277 873 ntBASIC18.72■□□□□ 0.59
Prpf38bQ80SY5 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Prpf38bQ80SY5 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Prpf38bQ80SY5 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Prpf38bQ80SY5 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.72■□□□□ 0.59
Prpf38bQ80SY5 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.72■□□□□ 0.59
Prpf38bQ80SY5 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.72■□□□□ 0.59
Prpf38bQ80SY5 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Prpf38bQ80SY5 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Prpf38bQ80SY5 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Prpf38bQ80SY5 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.72■□□□□ 0.59
Prpf38bQ80SY5 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Prpf38bQ80SY5 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Prpf38bQ80SY5 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Prpf38bQ80SY5 Gm7860-201ENSMUST00000121190 879 ntBASIC18.71■□□□□ 0.59
Prpf38bQ80SY5 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC18.71■□□□□ 0.59
Prpf38bQ80SY5 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.71■□□□□ 0.59
Prpf38bQ80SY5 Gm30025-201ENSMUST00000218555 728 ntBASIC18.71■□□□□ 0.59
Prpf38bQ80SY5 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.71■□□□□ 0.59
Prpf38bQ80SY5 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.71■□□□□ 0.59
Prpf38bQ80SY5 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Prpf38bQ80SY5 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Prpf38bQ80SY5 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
Prpf38bQ80SY5 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.7■□□□□ 0.58
Prpf38bQ80SY5 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Prpf38bQ80SY5 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Prpf38bQ80SY5 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms