Protein–RNA interactions for Protein: Q7TSH7

Kcnf1, Potassium voltage-gated channel subfamily F member 1, mousemouse

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnf1Q7TSH7 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Kcnf1Q7TSH7 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC19.71■□□□□ 0.75
Kcnf1Q7TSH7 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.71■□□□□ 0.75
Kcnf1Q7TSH7 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Kcnf1Q7TSH7 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Kcnf1Q7TSH7 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Kcnf1Q7TSH7 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.71■□□□□ 0.75
Kcnf1Q7TSH7 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.7■□□□□ 0.74
Kcnf1Q7TSH7 Gm37166-201ENSMUST00000195473 2474 ntBASIC19.7■□□□□ 0.74
Kcnf1Q7TSH7 Gm42918-201ENSMUST00000199249 1580 ntBASIC19.7■□□□□ 0.74
Kcnf1Q7TSH7 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Kcnf1Q7TSH7 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Kcnf1Q7TSH7 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Kcnf1Q7TSH7 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Kcnf1Q7TSH7 Gm27801-201ENSMUST00000184174 223 ntBASIC19.7■□□□□ 0.74
Kcnf1Q7TSH7 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.7■□□□□ 0.74
Kcnf1Q7TSH7 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Kcnf1Q7TSH7 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Kcnf1Q7TSH7 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Kcnf1Q7TSH7 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC19.7■□□□□ 0.74
Kcnf1Q7TSH7 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Kcnf1Q7TSH7 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Kcnf1Q7TSH7 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Kcnf1Q7TSH7 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Kcnf1Q7TSH7 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Kcnf1Q7TSH7 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Kcnf1Q7TSH7 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Kcnf1Q7TSH7 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Kcnf1Q7TSH7 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.69■□□□□ 0.74
Kcnf1Q7TSH7 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Kcnf1Q7TSH7 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Kcnf1Q7TSH7 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC19.69■□□□□ 0.74
Kcnf1Q7TSH7 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Kcnf1Q7TSH7 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Kcnf1Q7TSH7 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Kcnf1Q7TSH7 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC19.68■□□□□ 0.74
Kcnf1Q7TSH7 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Kcnf1Q7TSH7 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Kcnf1Q7TSH7 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Kcnf1Q7TSH7 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Kcnf1Q7TSH7 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Kcnf1Q7TSH7 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Kcnf1Q7TSH7 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Kcnf1Q7TSH7 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Kcnf1Q7TSH7 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Kcnf1Q7TSH7 Gm38205-201ENSMUST00000192243 258 ntBASIC19.68■□□□□ 0.74
Kcnf1Q7TSH7 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Kcnf1Q7TSH7 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Kcnf1Q7TSH7 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Kcnf1Q7TSH7 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Kcnf1Q7TSH7 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Kcnf1Q7TSH7 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Kcnf1Q7TSH7 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Kcnf1Q7TSH7 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Kcnf1Q7TSH7 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Kcnf1Q7TSH7 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Kcnf1Q7TSH7 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC19.68■□□□□ 0.74
Kcnf1Q7TSH7 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
Kcnf1Q7TSH7 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Kcnf1Q7TSH7 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Kcnf1Q7TSH7 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Kcnf1Q7TSH7 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Kcnf1Q7TSH7 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Kcnf1Q7TSH7 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Kcnf1Q7TSH7 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Kcnf1Q7TSH7 Dancr-204ENSMUST00000132389 2347 ntBASIC19.67■□□□□ 0.74
Kcnf1Q7TSH7 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC19.66■□□□□ 0.74
Kcnf1Q7TSH7 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Kcnf1Q7TSH7 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Kcnf1Q7TSH7 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Kcnf1Q7TSH7 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Kcnf1Q7TSH7 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.66■□□□□ 0.74
Kcnf1Q7TSH7 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Kcnf1Q7TSH7 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Kcnf1Q7TSH7 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Kcnf1Q7TSH7 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Kcnf1Q7TSH7 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Kcnf1Q7TSH7 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Kcnf1Q7TSH7 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Kcnf1Q7TSH7 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Kcnf1Q7TSH7 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Kcnf1Q7TSH7 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Kcnf1Q7TSH7 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Kcnf1Q7TSH7 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Kcnf1Q7TSH7 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Kcnf1Q7TSH7 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Kcnf1Q7TSH7 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.65■□□□□ 0.74
Kcnf1Q7TSH7 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Kcnf1Q7TSH7 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Kcnf1Q7TSH7 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Kcnf1Q7TSH7 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Kcnf1Q7TSH7 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Kcnf1Q7TSH7 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Kcnf1Q7TSH7 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Kcnf1Q7TSH7 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC19.65■□□□□ 0.74
Kcnf1Q7TSH7 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC19.64■□□□□ 0.74
Kcnf1Q7TSH7 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Kcnf1Q7TSH7 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Kcnf1Q7TSH7 Gm11421-201ENSMUST00000122124 294 ntBASIC19.64■□□□□ 0.73
Kcnf1Q7TSH7 Smad6-203ENSMUST00000179458 273 ntBASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms