Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn4bQ7M729 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Scn4bQ7M729 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
Scn4bQ7M729 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Scn4bQ7M729 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Scn4bQ7M729 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.54■□□□□ 0.4
Scn4bQ7M729 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.54■□□□□ 0.4
Scn4bQ7M729 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn4bQ7M729 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.54■□□□□ 0.4
Scn4bQ7M729 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn4bQ7M729 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scn4bQ7M729 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scn4bQ7M729 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Scn4bQ7M729 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scn4bQ7M729 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scn4bQ7M729 Gm13148-201ENSMUST00000118892 745 ntBASIC17.53■□□□□ 0.4
Scn4bQ7M729 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.53■□□□□ 0.4
Scn4bQ7M729 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Scn4bQ7M729 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.53■□□□□ 0.4
Scn4bQ7M729 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.53■□□□□ 0.4
Scn4bQ7M729 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scn4bQ7M729 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scn4bQ7M729 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scn4bQ7M729 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scn4bQ7M729 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Scn4bQ7M729 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scn4bQ7M729 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scn4bQ7M729 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.52■□□□□ 0.4
Scn4bQ7M729 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Scn4bQ7M729 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scn4bQ7M729 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Scn4bQ7M729 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Scn4bQ7M729 Gm10602-201ENSMUST00000098239 609 ntBASIC17.52■□□□□ 0.4
Scn4bQ7M729 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Scn4bQ7M729 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scn4bQ7M729 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
Scn4bQ7M729 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.52■□□□□ 0.4
Scn4bQ7M729 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Scn4bQ7M729 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Scn4bQ7M729 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Scn4bQ7M729 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Scn4bQ7M729 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Scn4bQ7M729 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Scn4bQ7M729 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn4bQ7M729 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn4bQ7M729 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Scn4bQ7M729 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn4bQ7M729 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.51■□□□□ 0.39
Scn4bQ7M729 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn4bQ7M729 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Scn4bQ7M729 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Scn4bQ7M729 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.51■□□□□ 0.39
Scn4bQ7M729 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.51■□□□□ 0.39
Scn4bQ7M729 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn4bQ7M729 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.51■□□□□ 0.39
Scn4bQ7M729 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Scn4bQ7M729 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.51■□□□□ 0.39
Scn4bQ7M729 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Scn4bQ7M729 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
Scn4bQ7M729 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Scn4bQ7M729 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn4bQ7M729 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn4bQ7M729 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn4bQ7M729 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn4bQ7M729 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn4bQ7M729 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn4bQ7M729 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Scn4bQ7M729 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn4bQ7M729 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn4bQ7M729 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Scn4bQ7M729 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn4bQ7M729 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn4bQ7M729 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn4bQ7M729 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn4bQ7M729 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn4bQ7M729 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.5■□□□□ 0.39
Scn4bQ7M729 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.5■□□□□ 0.39
Scn4bQ7M729 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scn4bQ7M729 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scn4bQ7M729 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Scn4bQ7M729 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scn4bQ7M729 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scn4bQ7M729 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Scn4bQ7M729 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scn4bQ7M729 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Scn4bQ7M729 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.49■□□□□ 0.39
Scn4bQ7M729 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Scn4bQ7M729 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Scn4bQ7M729 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Scn4bQ7M729 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scn4bQ7M729 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Scn4bQ7M729 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Scn4bQ7M729 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Scn4bQ7M729 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Scn4bQ7M729 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn4bQ7M729 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Scn4bQ7M729 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn4bQ7M729 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn4bQ7M729 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn4bQ7M729 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms