Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cspg5Q71M36 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cspg5Q71M36 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.61■□□□□ 0.57
Cspg5Q71M36 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cspg5Q71M36 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Cspg5Q71M36 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.61■□□□□ 0.57
Cspg5Q71M36 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.61■□□□□ 0.57
Cspg5Q71M36 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.61■□□□□ 0.57
Cspg5Q71M36 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cspg5Q71M36 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cspg5Q71M36 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cspg5Q71M36 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cspg5Q71M36 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
Cspg5Q71M36 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cspg5Q71M36 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cspg5Q71M36 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Cspg5Q71M36 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cspg5Q71M36 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cspg5Q71M36 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cspg5Q71M36 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cspg5Q71M36 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Cspg5Q71M36 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cspg5Q71M36 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cspg5Q71M36 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.6■□□□□ 0.57
Cspg5Q71M36 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cspg5Q71M36 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cspg5Q71M36 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cspg5Q71M36 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cspg5Q71M36 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cspg5Q71M36 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Cspg5Q71M36 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.6■□□□□ 0.57
Cspg5Q71M36 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cspg5Q71M36 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cspg5Q71M36 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cspg5Q71M36 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cspg5Q71M36 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cspg5Q71M36 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cspg5Q71M36 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cspg5Q71M36 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cspg5Q71M36 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cspg5Q71M36 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Cspg5Q71M36 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC18.59■□□□□ 0.57
Cspg5Q71M36 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cspg5Q71M36 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.59■□□□□ 0.57
Cspg5Q71M36 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.59■□□□□ 0.57
Cspg5Q71M36 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cspg5Q71M36 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cspg5Q71M36 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Cspg5Q71M36 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cspg5Q71M36 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Cspg5Q71M36 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cspg5Q71M36 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cspg5Q71M36 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cspg5Q71M36 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cspg5Q71M36 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Cspg5Q71M36 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cspg5Q71M36 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Cspg5Q71M36 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.58■□□□□ 0.56
Cspg5Q71M36 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.58■□□□□ 0.56
Cspg5Q71M36 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cspg5Q71M36 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cspg5Q71M36 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cspg5Q71M36 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cspg5Q71M36 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cspg5Q71M36 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cspg5Q71M36 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cspg5Q71M36 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Cspg5Q71M36 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cspg5Q71M36 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.57■□□□□ 0.56
Cspg5Q71M36 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cspg5Q71M36 Gm43799-201ENSMUST00000201845 579 ntBASIC18.57■□□□□ 0.56
Cspg5Q71M36 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.57■□□□□ 0.56
Cspg5Q71M36 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Cspg5Q71M36 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cspg5Q71M36 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cspg5Q71M36 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cspg5Q71M36 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cspg5Q71M36 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Cspg5Q71M36 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cspg5Q71M36 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Cspg5Q71M36 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cspg5Q71M36 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cspg5Q71M36 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cspg5Q71M36 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cspg5Q71M36 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cspg5Q71M36 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cspg5Q71M36 Mir5122-201ENSMUST00000175004 89 ntBASIC18.56■□□□□ 0.56
Cspg5Q71M36 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.56■□□□□ 0.56
Cspg5Q71M36 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cspg5Q71M36 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cspg5Q71M36 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cspg5Q71M36 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cspg5Q71M36 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cspg5Q71M36 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cspg5Q71M36 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cspg5Q71M36 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cspg5Q71M36 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cspg5Q71M36 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.55■□□□□ 0.56
Cspg5Q71M36 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cspg5Q71M36 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms