Protein–RNA interactions for Protein: Q6QR59

Tcaf3, TRPM8 channel-associated factor 3, mousemouse

Predictions only

Length 914 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcaf3Q6QR59 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tcaf3Q6QR59 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tcaf3Q6QR59 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tcaf3Q6QR59 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tcaf3Q6QR59 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tcaf3Q6QR59 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Tcaf3Q6QR59 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Tcaf3Q6QR59 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Tcaf3Q6QR59 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC19.69■□□□□ 0.74
Tcaf3Q6QR59 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
Tcaf3Q6QR59 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC19.69■□□□□ 0.74
Tcaf3Q6QR59 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tcaf3Q6QR59 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tcaf3Q6QR59 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Tcaf3Q6QR59 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Tcaf3Q6QR59 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tcaf3Q6QR59 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tcaf3Q6QR59 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tcaf3Q6QR59 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tcaf3Q6QR59 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tcaf3Q6QR59 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Tcaf3Q6QR59 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Tcaf3Q6QR59 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Tcaf3Q6QR59 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Tcaf3Q6QR59 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC19.68■□□□□ 0.74
Tcaf3Q6QR59 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tcaf3Q6QR59 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Tcaf3Q6QR59 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
Tcaf3Q6QR59 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tcaf3Q6QR59 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tcaf3Q6QR59 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tcaf3Q6QR59 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tcaf3Q6QR59 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tcaf3Q6QR59 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.68■□□□□ 0.74
Tcaf3Q6QR59 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.68■□□□□ 0.74
Tcaf3Q6QR59 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tcaf3Q6QR59 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Tcaf3Q6QR59 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Tcaf3Q6QR59 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC19.67■□□□□ 0.74
Tcaf3Q6QR59 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Tcaf3Q6QR59 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Tcaf3Q6QR59 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tcaf3Q6QR59 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Tcaf3Q6QR59 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tcaf3Q6QR59 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Tcaf3Q6QR59 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tcaf3Q6QR59 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tcaf3Q6QR59 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tcaf3Q6QR59 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Tcaf3Q6QR59 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Tcaf3Q6QR59 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tcaf3Q6QR59 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tcaf3Q6QR59 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tcaf3Q6QR59 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC19.66■□□□□ 0.74
Tcaf3Q6QR59 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tcaf3Q6QR59 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tcaf3Q6QR59 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Tcaf3Q6QR59 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Tcaf3Q6QR59 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC19.65■□□□□ 0.74
Tcaf3Q6QR59 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Tcaf3Q6QR59 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Tcaf3Q6QR59 Gm18959-201ENSMUST00000208954 655 ntBASIC19.65■□□□□ 0.74
Tcaf3Q6QR59 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tcaf3Q6QR59 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC19.65■□□□□ 0.74
Tcaf3Q6QR59 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tcaf3Q6QR59 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tcaf3Q6QR59 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tcaf3Q6QR59 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tcaf3Q6QR59 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tcaf3Q6QR59 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tcaf3Q6QR59 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tcaf3Q6QR59 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Tcaf3Q6QR59 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tcaf3Q6QR59 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC19.64■□□□□ 0.73
Tcaf3Q6QR59 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
Tcaf3Q6QR59 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tcaf3Q6QR59 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tcaf3Q6QR59 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
Tcaf3Q6QR59 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tcaf3Q6QR59 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Tcaf3Q6QR59 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Tcaf3Q6QR59 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Tcaf3Q6QR59 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tcaf3Q6QR59 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Tcaf3Q6QR59 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.64■□□□□ 0.73
Tcaf3Q6QR59 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tcaf3Q6QR59 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Tcaf3Q6QR59 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tcaf3Q6QR59 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Tcaf3Q6QR59 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tcaf3Q6QR59 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.63■□□□□ 0.73
Tcaf3Q6QR59 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tcaf3Q6QR59 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tcaf3Q6QR59 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Tcaf3Q6QR59 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Tcaf3Q6QR59 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tcaf3Q6QR59 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Tcaf3Q6QR59 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.63■□□□□ 0.73
Tcaf3Q6QR59 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC19.63■□□□□ 0.73
Tcaf3Q6QR59 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms