Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smarcc2Q6PDG5 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Smarcc2Q6PDG5 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smarcc2Q6PDG5 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smarcc2Q6PDG5 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smarcc2Q6PDG5 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC21.01■□□□□ 0.95
Smarcc2Q6PDG5 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smarcc2Q6PDG5 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Smarcc2Q6PDG5 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smarcc2Q6PDG5 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC21.01■□□□□ 0.95
Smarcc2Q6PDG5 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC21■□□□□ 0.95
Smarcc2Q6PDG5 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Smarcc2Q6PDG5 Dapk1-207ENSMUST00000226059 5009 ntBASIC21■□□□□ 0.95
Smarcc2Q6PDG5 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC21■□□□□ 0.95
Smarcc2Q6PDG5 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Smarcc2Q6PDG5 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Smarcc2Q6PDG5 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Smarcc2Q6PDG5 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Smarcc2Q6PDG5 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Smarcc2Q6PDG5 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC21■□□□□ 0.95
Smarcc2Q6PDG5 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC21■□□□□ 0.95
Smarcc2Q6PDG5 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC21■□□□□ 0.95
Smarcc2Q6PDG5 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC21■□□□□ 0.95
Smarcc2Q6PDG5 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Smarcc2Q6PDG5 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Smarcc2Q6PDG5 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
Smarcc2Q6PDG5 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Smarcc2Q6PDG5 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Smarcc2Q6PDG5 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Smarcc2Q6PDG5 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smarcc2Q6PDG5 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smarcc2Q6PDG5 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smarcc2Q6PDG5 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smarcc2Q6PDG5 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Smarcc2Q6PDG5 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Smarcc2Q6PDG5 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC20.99■□□□□ 0.95
Smarcc2Q6PDG5 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smarcc2Q6PDG5 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Smarcc2Q6PDG5 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Smarcc2Q6PDG5 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Smarcc2Q6PDG5 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Smarcc2Q6PDG5 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smarcc2Q6PDG5 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smarcc2Q6PDG5 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Smarcc2Q6PDG5 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smarcc2Q6PDG5 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smarcc2Q6PDG5 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smarcc2Q6PDG5 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smarcc2Q6PDG5 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC20.98■□□□□ 0.95
Smarcc2Q6PDG5 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Smarcc2Q6PDG5 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.98■□□□□ 0.95
Smarcc2Q6PDG5 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC20.98■□□□□ 0.95
Smarcc2Q6PDG5 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.98■□□□□ 0.95
Smarcc2Q6PDG5 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smarcc2Q6PDG5 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smarcc2Q6PDG5 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Smarcc2Q6PDG5 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smarcc2Q6PDG5 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Smarcc2Q6PDG5 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Smarcc2Q6PDG5 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Smarcc2Q6PDG5 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smarcc2Q6PDG5 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smarcc2Q6PDG5 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smarcc2Q6PDG5 Gm12527-201ENSMUST00000117967 564 ntBASIC20.97■□□□□ 0.95
Smarcc2Q6PDG5 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smarcc2Q6PDG5 Gm20049-201ENSMUST00000219950 730 ntBASIC20.97■□□□□ 0.95
Smarcc2Q6PDG5 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Smarcc2Q6PDG5 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.97■□□□□ 0.95
Smarcc2Q6PDG5 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smarcc2Q6PDG5 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.97■□□□□ 0.95
Smarcc2Q6PDG5 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC20.97■□□□□ 0.95
Smarcc2Q6PDG5 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smarcc2Q6PDG5 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smarcc2Q6PDG5 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smarcc2Q6PDG5 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smarcc2Q6PDG5 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smarcc2Q6PDG5 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smarcc2Q6PDG5 Gm10653-202ENSMUST00000139570 835 ntBASIC20.96■□□□□ 0.95
Smarcc2Q6PDG5 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC20.96■□□□□ 0.95
Smarcc2Q6PDG5 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smarcc2Q6PDG5 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Smarcc2Q6PDG5 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC20.96■□□□□ 0.95
Smarcc2Q6PDG5 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smarcc2Q6PDG5 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smarcc2Q6PDG5 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Smarcc2Q6PDG5 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smarcc2Q6PDG5 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smarcc2Q6PDG5 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smarcc2Q6PDG5 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Smarcc2Q6PDG5 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Smarcc2Q6PDG5 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smarcc2Q6PDG5 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Smarcc2Q6PDG5 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smarcc2Q6PDG5 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Smarcc2Q6PDG5 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Smarcc2Q6PDG5 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smarcc2Q6PDG5 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Smarcc2Q6PDG5 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Smarcc2Q6PDG5 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Smarcc2Q6PDG5 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms