Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Notch3Q61982 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Notch3Q61982 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Notch3Q61982 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Notch3Q61982 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC13.78□□□□□ -0.2
Notch3Q61982 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Notch3Q61982 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Notch3Q61982 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Notch3Q61982 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Notch3Q61982 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Notch3Q61982 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Notch3Q61982 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Notch3Q61982 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Notch3Q61982 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Notch3Q61982 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Notch3Q61982 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC13.78□□□□□ -0.2
Notch3Q61982 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Notch3Q61982 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Notch3Q61982 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Notch3Q61982 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Notch3Q61982 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Notch3Q61982 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Notch3Q61982 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Notch3Q61982 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Notch3Q61982 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Notch3Q61982 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Notch3Q61982 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Notch3Q61982 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Notch3Q61982 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Notch3Q61982 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Notch3Q61982 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Notch3Q61982 Gm10231-201ENSMUST00000181584 441 ntBASIC13.77□□□□□ -0.21
Notch3Q61982 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Notch3Q61982 Gm10175-202ENSMUST00000208752 441 ntBASIC13.77□□□□□ -0.21
Notch3Q61982 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Notch3Q61982 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Notch3Q61982 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC13.77□□□□□ -0.21
Notch3Q61982 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Notch3Q61982 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Notch3Q61982 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Notch3Q61982 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Notch3Q61982 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Notch3Q61982 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Notch3Q61982 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Notch3Q61982 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Notch3Q61982 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Notch3Q61982 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Notch3Q61982 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Notch3Q61982 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Notch3Q61982 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Notch3Q61982 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Notch3Q61982 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Notch3Q61982 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Notch3Q61982 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC13.76□□□□□ -0.21
Notch3Q61982 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Notch3Q61982 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Notch3Q61982 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Notch3Q61982 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Notch3Q61982 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Notch3Q61982 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Notch3Q61982 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Notch3Q61982 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Notch3Q61982 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Notch3Q61982 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Notch3Q61982 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Notch3Q61982 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Notch3Q61982 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Notch3Q61982 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Notch3Q61982 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Notch3Q61982 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Notch3Q61982 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Notch3Q61982 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Notch3Q61982 Gm45640-201ENSMUST00000210665 1896 ntBASIC13.75□□□□□ -0.21
Notch3Q61982 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Notch3Q61982 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC13.75□□□□□ -0.21
Notch3Q61982 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC13.75□□□□□ -0.21
Notch3Q61982 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Notch3Q61982 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Notch3Q61982 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Notch3Q61982 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Notch3Q61982 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Notch3Q61982 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Notch3Q61982 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Notch3Q61982 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Notch3Q61982 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Notch3Q61982 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC13.74□□□□□ -0.21
Notch3Q61982 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Notch3Q61982 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Notch3Q61982 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Notch3Q61982 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Notch3Q61982 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Notch3Q61982 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Notch3Q61982 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Notch3Q61982 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Notch3Q61982 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
Notch3Q61982 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Notch3Q61982 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Notch3Q61982 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Notch3Q61982 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC13.74□□□□□ -0.21
Notch3Q61982 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms