Protein–RNA interactions for Protein: Q61660

Foxj1, Forkhead box protein J1, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxj1Q61660 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Foxj1Q61660 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Foxj1Q61660 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Foxj1Q61660 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Foxj1Q61660 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Foxj1Q61660 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.27■□□□□ 0.52
Foxj1Q61660 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Foxj1Q61660 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Foxj1Q61660 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Foxj1Q61660 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
Foxj1Q61660 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.27■□□□□ 0.52
Foxj1Q61660 Gm30025-201ENSMUST00000218555 728 ntBASIC18.27■□□□□ 0.52
Foxj1Q61660 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Foxj1Q61660 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Foxj1Q61660 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.27■□□□□ 0.52
Foxj1Q61660 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Foxj1Q61660 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Foxj1Q61660 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.27■□□□□ 0.52
Foxj1Q61660 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Foxj1Q61660 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Foxj1Q61660 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Foxj1Q61660 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.26■□□□□ 0.51
Foxj1Q61660 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Foxj1Q61660 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Foxj1Q61660 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Foxj1Q61660 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Foxj1Q61660 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.26■□□□□ 0.51
Foxj1Q61660 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
Foxj1Q61660 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Foxj1Q61660 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.26■□□□□ 0.51
Foxj1Q61660 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Foxj1Q61660 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.26■□□□□ 0.51
Foxj1Q61660 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Foxj1Q61660 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Foxj1Q61660 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Foxj1Q61660 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Foxj1Q61660 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Foxj1Q61660 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Foxj1Q61660 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Foxj1Q61660 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Foxj1Q61660 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.26■□□□□ 0.51
Foxj1Q61660 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Foxj1Q61660 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Foxj1Q61660 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Foxj1Q61660 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Foxj1Q61660 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Foxj1Q61660 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Foxj1Q61660 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Foxj1Q61660 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Foxj1Q61660 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.25■□□□□ 0.51
Foxj1Q61660 Gm38285-201ENSMUST00000192928 922 ntBASIC18.25■□□□□ 0.51
Foxj1Q61660 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Foxj1Q61660 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Foxj1Q61660 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Foxj1Q61660 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Foxj1Q61660 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Foxj1Q61660 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Foxj1Q61660 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Foxj1Q61660 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Foxj1Q61660 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Foxj1Q61660 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.24■□□□□ 0.51
Foxj1Q61660 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Foxj1Q61660 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Foxj1Q61660 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Foxj1Q61660 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Foxj1Q61660 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Foxj1Q61660 Gm21814-202ENSMUST00000203277 873 ntBASIC18.23■□□□□ 0.51
Foxj1Q61660 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.23■□□□□ 0.51
Foxj1Q61660 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Foxj1Q61660 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Foxj1Q61660 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Foxj1Q61660 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Foxj1Q61660 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
Foxj1Q61660 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.23■□□□□ 0.51
Foxj1Q61660 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Foxj1Q61660 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Foxj1Q61660 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
Foxj1Q61660 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Foxj1Q61660 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC18.22■□□□□ 0.51
Foxj1Q61660 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Foxj1Q61660 Gm7367-201ENSMUST00000057611 492 ntBASIC18.22■□□□□ 0.51
Foxj1Q61660 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Foxj1Q61660 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Foxj1Q61660 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Foxj1Q61660 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Foxj1Q61660 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Foxj1Q61660 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Foxj1Q61660 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Foxj1Q61660 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.21■□□□□ 0.51
Foxj1Q61660 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.21■□□□□ 0.51
Foxj1Q61660 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Foxj1Q61660 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Foxj1Q61660 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC18.21■□□□□ 0.51
Foxj1Q61660 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Foxj1Q61660 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Foxj1Q61660 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Foxj1Q61660 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.21■□□□□ 0.51
Foxj1Q61660 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Foxj1Q61660 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Foxj1Q61660 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms