Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav2Q5R1I9 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav2Q5R1I9 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC14.35□□□□□ -0.11
Trav2Q5R1I9 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav2Q5R1I9 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trav2Q5R1I9 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav2Q5R1I9 Gm9194-201ENSMUST00000220749 1447 ntBASIC14.35□□□□□ -0.11
Trav2Q5R1I9 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav2Q5R1I9 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav2Q5R1I9 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC14.35□□□□□ -0.11
Trav2Q5R1I9 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav2Q5R1I9 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav2Q5R1I9 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav2Q5R1I9 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav2Q5R1I9 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav2Q5R1I9 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav2Q5R1I9 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav2Q5R1I9 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Trav2Q5R1I9 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav2Q5R1I9 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav2Q5R1I9 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav2Q5R1I9 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav2Q5R1I9 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Trav2Q5R1I9 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav2Q5R1I9 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav2Q5R1I9 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC14.34□□□□□ -0.11
Trav2Q5R1I9 Gm10252-201ENSMUST00000209541 832 ntBASIC14.34□□□□□ -0.11
Trav2Q5R1I9 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav2Q5R1I9 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Trav2Q5R1I9 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav2Q5R1I9 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav2Q5R1I9 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav2Q5R1I9 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav2Q5R1I9 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
Trav2Q5R1I9 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav2Q5R1I9 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trav2Q5R1I9 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav2Q5R1I9 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trav2Q5R1I9 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav2Q5R1I9 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
Trav2Q5R1I9 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav2Q5R1I9 Gm45906-201ENSMUST00000208911 1430 ntBASIC14.33□□□□□ -0.11
Trav2Q5R1I9 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav2Q5R1I9 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav2Q5R1I9 BC021767-201ENSMUST00000126387 1716 ntBASIC14.33□□□□□ -0.12
Trav2Q5R1I9 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav2Q5R1I9 Gm15853-202ENSMUST00000195518 2041 ntBASIC14.33□□□□□ -0.12
Trav2Q5R1I9 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav2Q5R1I9 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC14.33□□□□□ -0.12
Trav2Q5R1I9 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav2Q5R1I9 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC14.33□□□□□ -0.12
Trav2Q5R1I9 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC14.33□□□□□ -0.12
Trav2Q5R1I9 Gm10698-201ENSMUST00000182663 604 ntBASIC14.33□□□□□ -0.12
Trav2Q5R1I9 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC14.33□□□□□ -0.12
Trav2Q5R1I9 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trav2Q5R1I9 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav2Q5R1I9 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav2Q5R1I9 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav2Q5R1I9 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav2Q5R1I9 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav2Q5R1I9 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav2Q5R1I9 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav2Q5R1I9 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav2Q5R1I9 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav2Q5R1I9 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trav2Q5R1I9 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav2Q5R1I9 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav2Q5R1I9 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav2Q5R1I9 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav2Q5R1I9 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav2Q5R1I9 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav2Q5R1I9 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav2Q5R1I9 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav2Q5R1I9 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav2Q5R1I9 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Trav2Q5R1I9 Rncr4-201ENSMUST00000194541 2234 ntBASIC14.32□□□□□ -0.12
Trav2Q5R1I9 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav2Q5R1I9 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC14.32□□□□□ -0.12
Trav2Q5R1I9 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Trav2Q5R1I9 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav2Q5R1I9 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav2Q5R1I9 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav2Q5R1I9 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav2Q5R1I9 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav2Q5R1I9 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav2Q5R1I9 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav2Q5R1I9 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav2Q5R1I9 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav2Q5R1I9 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav2Q5R1I9 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav2Q5R1I9 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC14.32□□□□□ -0.12
Trav2Q5R1I9 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav2Q5R1I9 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav2Q5R1I9 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav2Q5R1I9 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav2Q5R1I9 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav2Q5R1I9 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav2Q5R1I9 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav2Q5R1I9 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav2Q5R1I9 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms