Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav3-1Q5R1I8 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav3-1Q5R1I8 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav3-1Q5R1I8 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav3-1Q5R1I8 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav3-1Q5R1I8 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav3-1Q5R1I8 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav3-1Q5R1I8 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav3-1Q5R1I8 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trav3-1Q5R1I8 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.44
Trav3-1Q5R1I8 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav3-1Q5R1I8 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trav3-1Q5R1I8 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav3-1Q5R1I8 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav3-1Q5R1I8 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Trav3-1Q5R1I8 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav3-1Q5R1I8 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav3-1Q5R1I8 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav3-1Q5R1I8 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Trav3-1Q5R1I8 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav3-1Q5R1I8 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav3-1Q5R1I8 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav3-1Q5R1I8 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC12.27□□□□□ -0.45
Trav3-1Q5R1I8 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav3-1Q5R1I8 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav3-1Q5R1I8 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav3-1Q5R1I8 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav3-1Q5R1I8 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trav3-1Q5R1I8 Gm10710-201ENSMUST00000047876 3971 ntBASIC12.26□□□□□ -0.45
Trav3-1Q5R1I8 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Trav3-1Q5R1I8 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav3-1Q5R1I8 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav3-1Q5R1I8 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav3-1Q5R1I8 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav3-1Q5R1I8 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav3-1Q5R1I8 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trav3-1Q5R1I8 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav3-1Q5R1I8 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav3-1Q5R1I8 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC12.26□□□□□ -0.45
Trav3-1Q5R1I8 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav3-1Q5R1I8 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trav3-1Q5R1I8 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav3-1Q5R1I8 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav3-1Q5R1I8 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trav3-1Q5R1I8 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav3-1Q5R1I8 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav3-1Q5R1I8 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav3-1Q5R1I8 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav3-1Q5R1I8 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trav3-1Q5R1I8 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trav3-1Q5R1I8 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav3-1Q5R1I8 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav3-1Q5R1I8 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3-1Q5R1I8 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3-1Q5R1I8 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
Trav3-1Q5R1I8 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3-1Q5R1I8 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3-1Q5R1I8 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3-1Q5R1I8 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3-1Q5R1I8 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC12.25□□□□□ -0.45
Trav3-1Q5R1I8 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3-1Q5R1I8 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3-1Q5R1I8 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Trav3-1Q5R1I8 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3-1Q5R1I8 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3-1Q5R1I8 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3-1Q5R1I8 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3-1Q5R1I8 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trav3-1Q5R1I8 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3-1Q5R1I8 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3-1Q5R1I8 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3-1Q5R1I8 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3-1Q5R1I8 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3-1Q5R1I8 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3-1Q5R1I8 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3-1Q5R1I8 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Trav3-1Q5R1I8 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3-1Q5R1I8 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trav3-1Q5R1I8 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3-1Q5R1I8 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trav3-1Q5R1I8 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trav3-1Q5R1I8 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3-1Q5R1I8 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3-1Q5R1I8 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3-1Q5R1I8 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3-1Q5R1I8 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3-1Q5R1I8 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3-1Q5R1I8 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3-1Q5R1I8 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Trav3-1Q5R1I8 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trav3-1Q5R1I8 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3-1Q5R1I8 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trav3-1Q5R1I8 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3-1Q5R1I8 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3-1Q5R1I8 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3-1Q5R1I8 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3-1Q5R1I8 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3-1Q5R1I8 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3-1Q5R1I8 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3-1Q5R1I8 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms