Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Rc3h1Q4VGL6 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rc3h1Q4VGL6 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rc3h1Q4VGL6 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rc3h1Q4VGL6 AC124581.1-201ENSMUST00000225416 1399 ntBASIC20.83■□□□□ 0.92
Rc3h1Q4VGL6 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rc3h1Q4VGL6 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rc3h1Q4VGL6 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rc3h1Q4VGL6 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC20.82■□□□□ 0.92
Rc3h1Q4VGL6 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rc3h1Q4VGL6 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC20.82■□□□□ 0.92
Rc3h1Q4VGL6 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rc3h1Q4VGL6 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Rc3h1Q4VGL6 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rc3h1Q4VGL6 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rc3h1Q4VGL6 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Rc3h1Q4VGL6 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rc3h1Q4VGL6 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rc3h1Q4VGL6 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rc3h1Q4VGL6 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC20.81■□□□□ 0.92
Rc3h1Q4VGL6 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rc3h1Q4VGL6 Tgds-204ENSMUST00000228543 1594 ntBASIC20.81■□□□□ 0.92
Rc3h1Q4VGL6 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rc3h1Q4VGL6 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC20.81■□□□□ 0.92
Rc3h1Q4VGL6 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rc3h1Q4VGL6 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rc3h1Q4VGL6 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rc3h1Q4VGL6 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rc3h1Q4VGL6 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC20.81■□□□□ 0.92
Rc3h1Q4VGL6 Gm20472-201ENSMUST00000174403 1240 ntBASIC20.81■□□□□ 0.92
Rc3h1Q4VGL6 Gm16042-201ENSMUST00000204813 1247 ntBASIC20.81■□□□□ 0.92
Rc3h1Q4VGL6 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rc3h1Q4VGL6 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rc3h1Q4VGL6 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rc3h1Q4VGL6 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Rc3h1Q4VGL6 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rc3h1Q4VGL6 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Rc3h1Q4VGL6 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rc3h1Q4VGL6 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rc3h1Q4VGL6 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rc3h1Q4VGL6 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rc3h1Q4VGL6 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rc3h1Q4VGL6 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rc3h1Q4VGL6 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rc3h1Q4VGL6 Krtap5-1-202ENSMUST00000188274 742 ntBASIC20.8■□□□□ 0.92
Rc3h1Q4VGL6 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC20.8■□□□□ 0.92
Rc3h1Q4VGL6 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rc3h1Q4VGL6 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rc3h1Q4VGL6 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Rc3h1Q4VGL6 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rc3h1Q4VGL6 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rc3h1Q4VGL6 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rc3h1Q4VGL6 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rc3h1Q4VGL6 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rc3h1Q4VGL6 Fst-202ENSMUST00000223640 2612 ntBASIC20.79■□□□□ 0.92
Rc3h1Q4VGL6 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rc3h1Q4VGL6 Gm12382-201ENSMUST00000122005 922 ntBASIC20.79■□□□□ 0.92
Rc3h1Q4VGL6 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Rc3h1Q4VGL6 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Rc3h1Q4VGL6 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rc3h1Q4VGL6 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Rc3h1Q4VGL6 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rc3h1Q4VGL6 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rc3h1Q4VGL6 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rc3h1Q4VGL6 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rc3h1Q4VGL6 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Rc3h1Q4VGL6 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC20.78■□□□□ 0.92
Rc3h1Q4VGL6 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rc3h1Q4VGL6 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rc3h1Q4VGL6 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rc3h1Q4VGL6 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rc3h1Q4VGL6 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rc3h1Q4VGL6 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rc3h1Q4VGL6 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rc3h1Q4VGL6 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rc3h1Q4VGL6 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC20.77■□□□□ 0.92
Rc3h1Q4VGL6 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Rc3h1Q4VGL6 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Rc3h1Q4VGL6 AC158538.1-201ENSMUST00000225870 294 ntBASIC20.77■□□□□ 0.92
Rc3h1Q4VGL6 Gm5417-201ENSMUST00000079706 384 ntBASIC20.77■□□□□ 0.92
Rc3h1Q4VGL6 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rc3h1Q4VGL6 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Rc3h1Q4VGL6 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rc3h1Q4VGL6 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rc3h1Q4VGL6 Gm7712-202ENSMUST00000222331 1510 ntBASIC20.77■□□□□ 0.92
Rc3h1Q4VGL6 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Rc3h1Q4VGL6 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rc3h1Q4VGL6 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC20.77■□□□□ 0.91
Rc3h1Q4VGL6 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.91
Rc3h1Q4VGL6 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Rc3h1Q4VGL6 AC108858.1-201ENSMUST00000228461 1498 ntBASIC20.76■□□□□ 0.91
Rc3h1Q4VGL6 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rc3h1Q4VGL6 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rc3h1Q4VGL6 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rc3h1Q4VGL6 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Rc3h1Q4VGL6 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Rc3h1Q4VGL6 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Rc3h1Q4VGL6 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rc3h1Q4VGL6 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC20.76■□□□□ 0.91
Rc3h1Q4VGL6 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms