Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ddx49Q4FZF3 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ddx49Q4FZF3 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ddx49Q4FZF3 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ddx49Q4FZF3 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ddx49Q4FZF3 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ddx49Q4FZF3 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ddx49Q4FZF3 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ddx49Q4FZF3 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ddx49Q4FZF3 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC20.89■□□□□ 0.93
Ddx49Q4FZF3 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Ddx49Q4FZF3 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ddx49Q4FZF3 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.89■□□□□ 0.93
Ddx49Q4FZF3 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ddx49Q4FZF3 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Ddx49Q4FZF3 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ddx49Q4FZF3 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Ddx49Q4FZF3 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ddx49Q4FZF3 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ddx49Q4FZF3 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC20.88■□□□□ 0.93
Ddx49Q4FZF3 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
Ddx49Q4FZF3 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ddx49Q4FZF3 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ddx49Q4FZF3 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
Ddx49Q4FZF3 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.88■□□□□ 0.93
Ddx49Q4FZF3 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ddx49Q4FZF3 Gm10654-201ENSMUST00000098653 1633 ntBASIC20.88■□□□□ 0.93
Ddx49Q4FZF3 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ddx49Q4FZF3 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ddx49Q4FZF3 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ddx49Q4FZF3 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ddx49Q4FZF3 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Ddx49Q4FZF3 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ddx49Q4FZF3 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC20.87■□□□□ 0.93
Ddx49Q4FZF3 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ddx49Q4FZF3 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ddx49Q4FZF3 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Ddx49Q4FZF3 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ddx49Q4FZF3 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ddx49Q4FZF3 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ddx49Q4FZF3 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ddx49Q4FZF3 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ddx49Q4FZF3 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ddx49Q4FZF3 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.87■□□□□ 0.93
Ddx49Q4FZF3 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ddx49Q4FZF3 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ddx49Q4FZF3 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ddx49Q4FZF3 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ddx49Q4FZF3 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ddx49Q4FZF3 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.86■□□□□ 0.93
Ddx49Q4FZF3 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ddx49Q4FZF3 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ddx49Q4FZF3 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.86■□□□□ 0.93
Ddx49Q4FZF3 Gm12085-201ENSMUST00000119263 940 ntBASIC20.86■□□□□ 0.93
Ddx49Q4FZF3 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ddx49Q4FZF3 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ddx49Q4FZF3 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ddx49Q4FZF3 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ddx49Q4FZF3 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ddx49Q4FZF3 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC20.85■□□□□ 0.93
Ddx49Q4FZF3 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ddx49Q4FZF3 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ddx49Q4FZF3 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ddx49Q4FZF3 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Ddx49Q4FZF3 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ddx49Q4FZF3 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ddx49Q4FZF3 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ddx49Q4FZF3 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ddx49Q4FZF3 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ddx49Q4FZF3 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ddx49Q4FZF3 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ddx49Q4FZF3 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ddx49Q4FZF3 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ddx49Q4FZF3 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ddx49Q4FZF3 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Ddx49Q4FZF3 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ddx49Q4FZF3 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ddx49Q4FZF3 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Ddx49Q4FZF3 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ddx49Q4FZF3 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC20.84■□□□□ 0.93
Ddx49Q4FZF3 Gm27463-201ENSMUST00000183569 57 ntBASIC20.84■□□□□ 0.93
Ddx49Q4FZF3 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Ddx49Q4FZF3 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ddx49Q4FZF3 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ddx49Q4FZF3 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ddx49Q4FZF3 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ddx49Q4FZF3 Gm44544-201ENSMUST00000207052 1844 ntBASIC20.83■□□□□ 0.93
Ddx49Q4FZF3 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.83■□□□□ 0.93
Ddx49Q4FZF3 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ddx49Q4FZF3 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Ddx49Q4FZF3 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ddx49Q4FZF3 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
Ddx49Q4FZF3 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
Ddx49Q4FZF3 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
Ddx49Q4FZF3 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Ddx49Q4FZF3 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
Ddx49Q4FZF3 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ddx49Q4FZF3 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ddx49Q4FZF3 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC20.82■□□□□ 0.92
Ddx49Q4FZF3 Mir5130-201ENSMUST00000175160 84 ntBASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms