Protein–RNA interactions for Protein: Q3UKJ7

Smu1, WD40 repeat-containing protein SMU1, mousemouse

Known RBP Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smu1Q3UKJ7 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smu1Q3UKJ7 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Smu1Q3UKJ7 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smu1Q3UKJ7 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smu1Q3UKJ7 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.27■□□□□ 0.36
Smu1Q3UKJ7 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.27■□□□□ 0.36
Smu1Q3UKJ7 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Smu1Q3UKJ7 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smu1Q3UKJ7 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Smu1Q3UKJ7 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Smu1Q3UKJ7 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.26■□□□□ 0.35
Smu1Q3UKJ7 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smu1Q3UKJ7 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smu1Q3UKJ7 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smu1Q3UKJ7 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Smu1Q3UKJ7 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smu1Q3UKJ7 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Smu1Q3UKJ7 Gm6420-201ENSMUST00000193885 723 ntBASIC17.26■□□□□ 0.35
Smu1Q3UKJ7 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Smu1Q3UKJ7 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Smu1Q3UKJ7 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.26■□□□□ 0.35
Smu1Q3UKJ7 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.26■□□□□ 0.35
Smu1Q3UKJ7 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smu1Q3UKJ7 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smu1Q3UKJ7 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
Smu1Q3UKJ7 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smu1Q3UKJ7 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smu1Q3UKJ7 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smu1Q3UKJ7 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smu1Q3UKJ7 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smu1Q3UKJ7 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Smu1Q3UKJ7 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Smu1Q3UKJ7 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smu1Q3UKJ7 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Smu1Q3UKJ7 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smu1Q3UKJ7 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Smu1Q3UKJ7 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.25■□□□□ 0.35
Smu1Q3UKJ7 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smu1Q3UKJ7 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.25■□□□□ 0.35
Smu1Q3UKJ7 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smu1Q3UKJ7 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smu1Q3UKJ7 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smu1Q3UKJ7 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smu1Q3UKJ7 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smu1Q3UKJ7 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.25■□□□□ 0.35
Smu1Q3UKJ7 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smu1Q3UKJ7 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smu1Q3UKJ7 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smu1Q3UKJ7 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smu1Q3UKJ7 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smu1Q3UKJ7 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.24■□□□□ 0.35
Smu1Q3UKJ7 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.24■□□□□ 0.35
Smu1Q3UKJ7 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.24■□□□□ 0.35
Smu1Q3UKJ7 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.24■□□□□ 0.35
Smu1Q3UKJ7 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smu1Q3UKJ7 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smu1Q3UKJ7 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smu1Q3UKJ7 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smu1Q3UKJ7 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smu1Q3UKJ7 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.23■□□□□ 0.35
Smu1Q3UKJ7 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smu1Q3UKJ7 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Smu1Q3UKJ7 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Smu1Q3UKJ7 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smu1Q3UKJ7 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smu1Q3UKJ7 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smu1Q3UKJ7 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Smu1Q3UKJ7 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Smu1Q3UKJ7 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
Smu1Q3UKJ7 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.23■□□□□ 0.35
Smu1Q3UKJ7 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smu1Q3UKJ7 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smu1Q3UKJ7 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smu1Q3UKJ7 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Smu1Q3UKJ7 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smu1Q3UKJ7 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smu1Q3UKJ7 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smu1Q3UKJ7 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smu1Q3UKJ7 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Smu1Q3UKJ7 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smu1Q3UKJ7 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smu1Q3UKJ7 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Smu1Q3UKJ7 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Smu1Q3UKJ7 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Smu1Q3UKJ7 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smu1Q3UKJ7 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Smu1Q3UKJ7 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smu1Q3UKJ7 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smu1Q3UKJ7 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Smu1Q3UKJ7 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.21■□□□□ 0.35
Smu1Q3UKJ7 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smu1Q3UKJ7 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Smu1Q3UKJ7 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
Smu1Q3UKJ7 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smu1Q3UKJ7 Nespas-201ENSMUST00000143738 1083 ntBASIC17.21■□□□□ 0.35
Smu1Q3UKJ7 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.21■□□□□ 0.35
Smu1Q3UKJ7 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
Smu1Q3UKJ7 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smu1Q3UKJ7 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Smu1Q3UKJ7 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms