Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Ldb1P70662 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ldb1P70662 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.92■□□□□ 0.46
Ldb1P70662 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.92■□□□□ 0.46
Ldb1P70662 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ldb1P70662 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Ldb1P70662 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.92■□□□□ 0.46
Ldb1P70662 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Ldb1P70662 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Ldb1P70662 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Ldb1P70662 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
Ldb1P70662 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ldb1P70662 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ldb1P70662 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ldb1P70662 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
Ldb1P70662 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ldb1P70662 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Ldb1P70662 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ldb1P70662 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ldb1P70662 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ldb1P70662 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.91■□□□□ 0.46
Ldb1P70662 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.91■□□□□ 0.46
Ldb1P70662 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ldb1P70662 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ldb1P70662 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ldb1P70662 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ldb1P70662 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ldb1P70662 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ldb1P70662 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ldb1P70662 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ldb1P70662 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ldb1P70662 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ldb1P70662 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ldb1P70662 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.9■□□□□ 0.46
Ldb1P70662 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ldb1P70662 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.9■□□□□ 0.46
Ldb1P70662 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.9■□□□□ 0.46
Ldb1P70662 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Ldb1P70662 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.9■□□□□ 0.46
Ldb1P70662 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ldb1P70662 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ldb1P70662 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Ldb1P70662 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Ldb1P70662 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.9■□□□□ 0.46
Ldb1P70662 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ldb1P70662 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ldb1P70662 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ldb1P70662 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ldb1P70662 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.9■□□□□ 0.46
Ldb1P70662 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.46
Ldb1P70662 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ldb1P70662 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ldb1P70662 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ldb1P70662 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ldb1P70662 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Ldb1P70662 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.89■□□□□ 0.45
Ldb1P70662 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ldb1P70662 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ldb1P70662 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ldb1P70662 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ldb1P70662 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.89■□□□□ 0.45
Ldb1P70662 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ldb1P70662 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ldb1P70662 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ldb1P70662 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ldb1P70662 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ldb1P70662 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ldb1P70662 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ldb1P70662 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ldb1P70662 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ldb1P70662 Gm26524-201ENSMUST00000192339 390 ntBASIC17.88■□□□□ 0.45
Ldb1P70662 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ldb1P70662 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Ldb1P70662 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ldb1P70662 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ldb1P70662 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ldb1P70662 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Ldb1P70662 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ldb1P70662 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ldb1P70662 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ldb1P70662 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ldb1P70662 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ldb1P70662 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ldb1P70662 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ldb1P70662 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.87■□□□□ 0.45
Ldb1P70662 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ldb1P70662 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ldb1P70662 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Ldb1P70662 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ldb1P70662 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.87■□□□□ 0.45
Ldb1P70662 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ldb1P70662 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.87■□□□□ 0.45
Ldb1P70662 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ldb1P70662 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.87■□□□□ 0.45
Ldb1P70662 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.87■□□□□ 0.45
Ldb1P70662 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ldb1P70662 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ldb1P70662 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.86■□□□□ 0.45
Ldb1P70662 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ldb1P70662 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms