Protein–RNA interactions for Protein: P70196

Traf6, TNF receptor-associated factor 6, mousemouse

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf6P70196 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Traf6P70196 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.71■□□□□ 0.43
Traf6P70196 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Traf6P70196 Gm42778-201ENSMUST00000199644 553 ntBASIC17.71■□□□□ 0.43
Traf6P70196 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Traf6P70196 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Traf6P70196 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Traf6P70196 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Traf6P70196 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Traf6P70196 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Traf6P70196 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Traf6P70196 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.7■□□□□ 0.42
Traf6P70196 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Traf6P70196 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Traf6P70196 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Traf6P70196 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Traf6P70196 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.7■□□□□ 0.42
Traf6P70196 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Traf6P70196 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Traf6P70196 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Traf6P70196 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Traf6P70196 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
Traf6P70196 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Traf6P70196 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Traf6P70196 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Traf6P70196 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Traf6P70196 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.7■□□□□ 0.42
Traf6P70196 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Traf6P70196 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.69■□□□□ 0.42
Traf6P70196 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Traf6P70196 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Traf6P70196 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.69■□□□□ 0.42
Traf6P70196 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Traf6P70196 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.69■□□□□ 0.42
Traf6P70196 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Traf6P70196 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Traf6P70196 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Traf6P70196 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Traf6P70196 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.69■□□□□ 0.42
Traf6P70196 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.69■□□□□ 0.42
Traf6P70196 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Traf6P70196 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.69■□□□□ 0.42
Traf6P70196 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.68■□□□□ 0.42
Traf6P70196 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Traf6P70196 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Traf6P70196 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Traf6P70196 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Traf6P70196 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Traf6P70196 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Traf6P70196 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Traf6P70196 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Traf6P70196 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Traf6P70196 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Traf6P70196 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Traf6P70196 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Traf6P70196 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Traf6P70196 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Traf6P70196 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Traf6P70196 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Traf6P70196 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Traf6P70196 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Traf6P70196 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Traf6P70196 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Traf6P70196 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.67■□□□□ 0.42
Traf6P70196 Gm18671-201ENSMUST00000214826 683 ntBASIC17.67■□□□□ 0.42
Traf6P70196 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Traf6P70196 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.67■□□□□ 0.42
Traf6P70196 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Traf6P70196 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Traf6P70196 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Traf6P70196 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Traf6P70196 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.66■□□□□ 0.42
Traf6P70196 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Traf6P70196 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Traf6P70196 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Traf6P70196 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Traf6P70196 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Traf6P70196 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Traf6P70196 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Traf6P70196 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.66■□□□□ 0.42
Traf6P70196 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Traf6P70196 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Traf6P70196 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Traf6P70196 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
Traf6P70196 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Traf6P70196 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Traf6P70196 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Traf6P70196 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Traf6P70196 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.65■□□□□ 0.42
Traf6P70196 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Traf6P70196 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.65■□□□□ 0.42
Traf6P70196 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Traf6P70196 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Traf6P70196 Gm42569-201ENSMUST00000200539 472 ntBASIC17.65■□□□□ 0.42
Traf6P70196 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.65■□□□□ 0.42
Traf6P70196 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.65■□□□□ 0.42
Traf6P70196 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.65■□□□□ 0.42
Traf6P70196 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Traf6P70196 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Traf6P70196 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms