Protein–RNA interactions for Protein: P58774

Tpm2, Tropomyosin beta chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm2P58774 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
Tpm2P58774 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tpm2P58774 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tpm2P58774 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tpm2P58774 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tpm2P58774 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Tpm2P58774 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tpm2P58774 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tpm2P58774 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Tpm2P58774 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.65■□□□□ 0.9
Tpm2P58774 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tpm2P58774 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Tpm2P58774 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.65■□□□□ 0.9
Tpm2P58774 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.65■□□□□ 0.9
Tpm2P58774 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.65■□□□□ 0.9
Tpm2P58774 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tpm2P58774 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tpm2P58774 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tpm2P58774 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tpm2P58774 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC20.65■□□□□ 0.9
Tpm2P58774 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Tpm2P58774 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Tpm2P58774 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Tpm2P58774 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Tpm2P58774 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Tpm2P58774 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.64■□□□□ 0.9
Tpm2P58774 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tpm2P58774 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tpm2P58774 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tpm2P58774 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tpm2P58774 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tpm2P58774 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tpm2P58774 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.64■□□□□ 0.89
Tpm2P58774 Smad6-203ENSMUST00000179458 273 ntBASIC20.64■□□□□ 0.89
Tpm2P58774 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Tpm2P58774 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tpm2P58774 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Tpm2P58774 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Tpm2P58774 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tpm2P58774 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Tpm2P58774 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tpm2P58774 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Tpm2P58774 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.63■□□□□ 0.89
Tpm2P58774 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
Tpm2P58774 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tpm2P58774 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Tpm2P58774 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tpm2P58774 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tpm2P58774 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tpm2P58774 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC20.62■□□□□ 0.89
Tpm2P58774 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tpm2P58774 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tpm2P58774 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tpm2P58774 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC20.62■□□□□ 0.89
Tpm2P58774 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Tpm2P58774 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Tpm2P58774 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tpm2P58774 Gm7860-201ENSMUST00000121190 879 ntBASIC20.62■□□□□ 0.89
Tpm2P58774 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.62■□□□□ 0.89
Tpm2P58774 Gm27801-201ENSMUST00000184174 223 ntBASIC20.62■□□□□ 0.89
Tpm2P58774 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.62■□□□□ 0.89
Tpm2P58774 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Tpm2P58774 Gm43338-201ENSMUST00000198617 2223 ntBASIC20.62■□□□□ 0.89
Tpm2P58774 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Tpm2P58774 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tpm2P58774 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tpm2P58774 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC20.61■□□□□ 0.89
Tpm2P58774 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tpm2P58774 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Tpm2P58774 Gm8493-201ENSMUST00000196881 489 ntBASIC20.61■□□□□ 0.89
Tpm2P58774 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tpm2P58774 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Tpm2P58774 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Tpm2P58774 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tpm2P58774 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tpm2P58774 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tpm2P58774 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tpm2P58774 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tpm2P58774 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Tpm2P58774 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Tpm2P58774 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tpm2P58774 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC20.6■□□□□ 0.89
Tpm2P58774 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tpm2P58774 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tpm2P58774 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.6■□□□□ 0.89
Tpm2P58774 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tpm2P58774 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tpm2P58774 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tpm2P58774 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tpm2P58774 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tpm2P58774 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Tpm2P58774 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tpm2P58774 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tpm2P58774 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Tpm2P58774 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tpm2P58774 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tpm2P58774 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Tpm2P58774 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tpm2P58774 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tpm2P58774 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms