Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CLDN20P56880 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN20P56880 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN20P56880 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.88■□□□□ 0.61
CLDN20P56880 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.87■□□□□ 0.61
CLDN20P56880 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLDN20P56880 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLDN20P56880 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLDN20P56880 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLDN20P56880 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CLDN20P56880 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.87■□□□□ 0.61
CLDN20P56880 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.87■□□□□ 0.61
CLDN20P56880 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLDN20P56880 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLDN20P56880 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.87■□□□□ 0.61
CLDN20P56880 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLDN20P56880 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
CLDN20P56880 AL391422.3-201ENST00000603791 2761 ntBASIC18.87■□□□□ 0.61
CLDN20P56880 RAP2CP1-201ENST00000605103 478 ntBASIC18.87■□□□□ 0.61
CLDN20P56880 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CLDN20P56880 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN20P56880 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN20P56880 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.86■□□□□ 0.61
CLDN20P56880 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN20P56880 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN20P56880 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN20P56880 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN20P56880 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.86■□□□□ 0.61
CLDN20P56880 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN20P56880 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.86■□□□□ 0.61
CLDN20P56880 KRT16P2-201ENST00000414673 1423 ntBASIC18.86■□□□□ 0.61
CLDN20P56880 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN20P56880 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN20P56880 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN20P56880 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.86■□□□□ 0.61
CLDN20P56880 DUX4L16-201ENST00000555130 1264 ntBASIC18.86■□□□□ 0.61
CLDN20P56880 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.86■□□□□ 0.61
CLDN20P56880 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN20P56880 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.86■□□□□ 0.61
CLDN20P56880 AC010536.3-201ENST00000620306 533 ntBASIC18.86■□□□□ 0.61
CLDN20P56880 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN20P56880 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN20P56880 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.86■□□□□ 0.61
CLDN20P56880 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.86■□□□□ 0.61
CLDN20P56880 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CLDN20P56880 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN20P56880 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN20P56880 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN20P56880 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.86■□□□□ 0.61
CLDN20P56880 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN20P56880 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN20P56880 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN20P56880 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN20P56880 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN20P56880 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CLDN20P56880 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN20P56880 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.85■□□□□ 0.61
CLDN20P56880 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.85■□□□□ 0.61
CLDN20P56880 AC244015.2-201ENST00000616358 1861 ntBASIC18.85■□□□□ 0.61
CLDN20P56880 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN20P56880 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN20P56880 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN20P56880 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.85■□□□□ 0.61
CLDN20P56880 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.85■□□□□ 0.61
CLDN20P56880 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN20P56880 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN20P56880 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN20P56880 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN20P56880 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN20P56880 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN20P56880 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN20P56880 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.84■□□□□ 0.61
CLDN20P56880 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.84■□□□□ 0.61
CLDN20P56880 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.84■□□□□ 0.61
CLDN20P56880 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.84■□□□□ 0.61
CLDN20P56880 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.84■□□□□ 0.61
CLDN20P56880 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.84■□□□□ 0.61
CLDN20P56880 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN20P56880 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CLDN20P56880 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN20P56880 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN20P56880 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.84■□□□□ 0.61
CLDN20P56880 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CLDN20P56880 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.83■□□□□ 0.61
CLDN20P56880 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLDN20P56880 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.83■□□□□ 0.61
CLDN20P56880 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CLDN20P56880 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN20P56880 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.83■□□□□ 0.6
CLDN20P56880 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.83■□□□□ 0.6
CLDN20P56880 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.83■□□□□ 0.6
CLDN20P56880 AC026185.1-201ENST00000445748 174 ntBASIC18.83■□□□□ 0.6
CLDN20P56880 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.83■□□□□ 0.6
CLDN20P56880 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.83■□□□□ 0.6
CLDN20P56880 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.83■□□□□ 0.6
CLDN20P56880 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.83■□□□□ 0.6
CLDN20P56880 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN20P56880 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.83■□□□□ 0.6
CLDN20P56880 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN20P56880 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms