Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC19.03■□□□□ 0.64
Shmt1P50431 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Shmt1P50431 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC19.03■□□□□ 0.64
Shmt1P50431 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Shmt1P50431 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Shmt1P50431 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Shmt1P50431 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Shmt1P50431 Gm15375-201ENSMUST00000119510 849 ntBASIC19.02■□□□□ 0.64
Shmt1P50431 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Shmt1P50431 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Shmt1P50431 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC19.02■□□□□ 0.64
Shmt1P50431 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Shmt1P50431 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Shmt1P50431 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Shmt1P50431 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Shmt1P50431 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
Shmt1P50431 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Shmt1P50431 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.02■□□□□ 0.64
Shmt1P50431 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Shmt1P50431 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Shmt1P50431 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Shmt1P50431 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Shmt1P50431 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC19.01■□□□□ 0.63
Shmt1P50431 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Shmt1P50431 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Shmt1P50431 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Shmt1P50431 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Shmt1P50431 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC19.01■□□□□ 0.63
Shmt1P50431 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Shmt1P50431 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Shmt1P50431 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.01■□□□□ 0.63
Shmt1P50431 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Shmt1P50431 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Shmt1P50431 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Shmt1P50431 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Shmt1P50431 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Shmt1P50431 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Shmt1P50431 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.01■□□□□ 0.63
Shmt1P50431 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Shmt1P50431 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Shmt1P50431 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Shmt1P50431 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.01■□□□□ 0.63
Shmt1P50431 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Shmt1P50431 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Shmt1P50431 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Shmt1P50431 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19■□□□□ 0.63
Shmt1P50431 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Shmt1P50431 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19■□□□□ 0.63
Shmt1P50431 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Shmt1P50431 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19■□□□□ 0.63
Shmt1P50431 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19■□□□□ 0.63
Shmt1P50431 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19■□□□□ 0.63
Shmt1P50431 Gm5953-201ENSMUST00000220644 2616 ntBASIC19■□□□□ 0.63
Shmt1P50431 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19■□□□□ 0.63
Shmt1P50431 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Shmt1P50431 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Shmt1P50431 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Shmt1P50431 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.99■□□□□ 0.63
Shmt1P50431 Gm15378-201ENSMUST00000121894 207 ntBASIC18.99■□□□□ 0.63
Shmt1P50431 Mir2861-201ENSMUST00000175539 82 ntBASIC18.99■□□□□ 0.63
Shmt1P50431 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Shmt1P50431 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Shmt1P50431 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.99■□□□□ 0.63
Shmt1P50431 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.99■□□□□ 0.63
Shmt1P50431 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Shmt1P50431 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Shmt1P50431 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
Shmt1P50431 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.99■□□□□ 0.63
Shmt1P50431 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Shmt1P50431 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Shmt1P50431 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Shmt1P50431 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Shmt1P50431 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.98■□□□□ 0.63
Shmt1P50431 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.98■□□□□ 0.63
Shmt1P50431 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Shmt1P50431 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.98■□□□□ 0.63
Shmt1P50431 Mir6982-201ENSMUST00000184354 68 ntBASIC18.98■□□□□ 0.63
Shmt1P50431 Gm42545-201ENSMUST00000202755 922 ntBASIC18.98■□□□□ 0.63
Shmt1P50431 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Shmt1P50431 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Shmt1P50431 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Shmt1P50431 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Shmt1P50431 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Shmt1P50431 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Shmt1P50431 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Shmt1P50431 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Shmt1P50431 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Shmt1P50431 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Shmt1P50431 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Shmt1P50431 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.97■□□□□ 0.63
Shmt1P50431 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Shmt1P50431 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Shmt1P50431 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.97■□□□□ 0.63
Shmt1P50431 Gm18025-201ENSMUST00000221733 862 ntBASIC18.97■□□□□ 0.63
Shmt1P50431 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Shmt1P50431 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Shmt1P50431 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Shmt1P50431 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Shmt1P50431 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.97■□□□□ 0.63
Shmt1P50431 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms