Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vps4bP46467 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.27■□□□□ 0.52
Vps4bP46467 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vps4bP46467 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Vps4bP46467 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Vps4bP46467 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Vps4bP46467 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Vps4bP46467 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Vps4bP46467 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Vps4bP46467 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps4bP46467 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Vps4bP46467 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps4bP46467 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Vps4bP46467 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps4bP46467 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps4bP46467 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps4bP46467 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps4bP46467 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Vps4bP46467 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps4bP46467 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps4bP46467 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.26■□□□□ 0.51
Vps4bP46467 Gm7514-201ENSMUST00000209475 934 ntBASIC18.26■□□□□ 0.51
Vps4bP46467 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps4bP46467 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps4bP46467 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps4bP46467 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.26■□□□□ 0.51
Vps4bP46467 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps4bP46467 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps4bP46467 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vps4bP46467 Gm10849-201ENSMUST00000100397 618 ntBASIC18.25■□□□□ 0.51
Vps4bP46467 Nespas-201ENSMUST00000143738 1083 ntBASIC18.25■□□□□ 0.51
Vps4bP46467 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Vps4bP46467 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
Vps4bP46467 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vps4bP46467 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Vps4bP46467 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vps4bP46467 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.25■□□□□ 0.51
Vps4bP46467 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Vps4bP46467 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Vps4bP46467 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Vps4bP46467 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Vps4bP46467 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Vps4bP46467 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps4bP46467 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps4bP46467 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Vps4bP46467 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps4bP46467 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps4bP46467 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps4bP46467 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Vps4bP46467 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps4bP46467 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Vps4bP46467 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.24■□□□□ 0.51
Vps4bP46467 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.24■□□□□ 0.51
Vps4bP46467 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps4bP46467 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps4bP46467 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps4bP46467 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Vps4bP46467 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps4bP46467 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Vps4bP46467 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vps4bP46467 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vps4bP46467 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Vps4bP46467 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vps4bP46467 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Vps4bP46467 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vps4bP46467 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Vps4bP46467 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.23■□□□□ 0.51
Vps4bP46467 Gm10033-202ENSMUST00000211874 928 ntBASIC18.23■□□□□ 0.51
Vps4bP46467 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vps4bP46467 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Vps4bP46467 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vps4bP46467 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vps4bP46467 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vps4bP46467 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vps4bP46467 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vps4bP46467 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vps4bP46467 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vps4bP46467 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Vps4bP46467 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.22■□□□□ 0.51
Vps4bP46467 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vps4bP46467 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Vps4bP46467 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Vps4bP46467 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.22■□□□□ 0.51
Vps4bP46467 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vps4bP46467 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Vps4bP46467 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vps4bP46467 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Vps4bP46467 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vps4bP46467 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vps4bP46467 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vps4bP46467 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Vps4bP46467 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps4bP46467 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps4bP46467 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Vps4bP46467 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Vps4bP46467 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Vps4bP46467 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps4bP46467 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps4bP46467 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.21■□□□□ 0.51
Vps4bP46467 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms