Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hist1h1aP43275 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Hist1h1aP43275 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hist1h1aP43275 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hist1h1aP43275 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hist1h1aP43275 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hist1h1aP43275 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hist1h1aP43275 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Hist1h1aP43275 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC14.85□□□□□ -0.03
Hist1h1aP43275 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hist1h1aP43275 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Hist1h1aP43275 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Hist1h1aP43275 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hist1h1aP43275 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hist1h1aP43275 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hist1h1aP43275 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hist1h1aP43275 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Hist1h1aP43275 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hist1h1aP43275 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hist1h1aP43275 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Hist1h1aP43275 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Hist1h1aP43275 AC121598.2-201ENSMUST00000228376 2325 ntBASIC14.84□□□□□ -0.03
Hist1h1aP43275 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hist1h1aP43275 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hist1h1aP43275 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hist1h1aP43275 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC14.84□□□□□ -0.03
Hist1h1aP43275 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC14.84□□□□□ -0.03
Hist1h1aP43275 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hist1h1aP43275 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hist1h1aP43275 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Hist1h1aP43275 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC14.84□□□□□ -0.03
Hist1h1aP43275 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC14.84□□□□□ -0.03
Hist1h1aP43275 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC14.84□□□□□ -0.03
Hist1h1aP43275 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Hist1h1aP43275 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC14.84□□□□□ -0.03
Hist1h1aP43275 Gm19094-201ENSMUST00000209791 1246 ntBASIC14.84□□□□□ -0.03
Hist1h1aP43275 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hist1h1aP43275 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hist1h1aP43275 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Hist1h1aP43275 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC14.84□□□□□ -0.03
Hist1h1aP43275 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Hist1h1aP43275 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hist1h1aP43275 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Hist1h1aP43275 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hist1h1aP43275 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC14.84□□□□□ -0.03
Hist1h1aP43275 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hist1h1aP43275 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hist1h1aP43275 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hist1h1aP43275 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hist1h1aP43275 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Hist1h1aP43275 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Hist1h1aP43275 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Hist1h1aP43275 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Hist1h1aP43275 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Hist1h1aP43275 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Hist1h1aP43275 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hist1h1aP43275 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hist1h1aP43275 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Hist1h1aP43275 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hist1h1aP43275 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hist1h1aP43275 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC14.83□□□□□ -0.04
Hist1h1aP43275 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Hist1h1aP43275 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hist1h1aP43275 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hist1h1aP43275 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hist1h1aP43275 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hist1h1aP43275 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hist1h1aP43275 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hist1h1aP43275 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hist1h1aP43275 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hist1h1aP43275 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Hist1h1aP43275 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
Hist1h1aP43275 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hist1h1aP43275 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Hist1h1aP43275 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hist1h1aP43275 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Hist1h1aP43275 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hist1h1aP43275 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hist1h1aP43275 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hist1h1aP43275 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hist1h1aP43275 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hist1h1aP43275 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hist1h1aP43275 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Hist1h1aP43275 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hist1h1aP43275 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hist1h1aP43275 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hist1h1aP43275 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC14.82□□□□□ -0.04
Hist1h1aP43275 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hist1h1aP43275 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hist1h1aP43275 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hist1h1aP43275 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hist1h1aP43275 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hist1h1aP43275 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Hist1h1aP43275 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC14.82□□□□□ -0.04
Hist1h1aP43275 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hist1h1aP43275 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hist1h1aP43275 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Hist1h1aP43275 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hist1h1aP43275 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Hist1h1aP43275 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms