Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LdlrP35951 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
LdlrP35951 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
LdlrP35951 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LdlrP35951 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LdlrP35951 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LdlrP35951 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.89■□□□□ 0.45
LdlrP35951 Gm7514-201ENSMUST00000209475 934 ntBASIC17.89■□□□□ 0.45
LdlrP35951 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
LdlrP35951 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LdlrP35951 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.89■□□□□ 0.45
LdlrP35951 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LdlrP35951 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
LdlrP35951 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
LdlrP35951 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
LdlrP35951 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LdlrP35951 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LdlrP35951 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
LdlrP35951 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LdlrP35951 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LdlrP35951 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
LdlrP35951 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LdlrP35951 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LdlrP35951 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LdlrP35951 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.88■□□□□ 0.45
LdlrP35951 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
LdlrP35951 Gm10653-202ENSMUST00000139570 835 ntBASIC17.88■□□□□ 0.45
LdlrP35951 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LdlrP35951 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LdlrP35951 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
LdlrP35951 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LdlrP35951 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.88■□□□□ 0.45
LdlrP35951 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
LdlrP35951 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.88■□□□□ 0.45
LdlrP35951 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LdlrP35951 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LdlrP35951 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LdlrP35951 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LdlrP35951 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LdlrP35951 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.87■□□□□ 0.45
LdlrP35951 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.87■□□□□ 0.45
LdlrP35951 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
LdlrP35951 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LdlrP35951 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LdlrP35951 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LdlrP35951 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LdlrP35951 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LdlrP35951 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LdlrP35951 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LdlrP35951 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
LdlrP35951 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
LdlrP35951 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LdlrP35951 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LdlrP35951 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LdlrP35951 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LdlrP35951 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LdlrP35951 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LdlrP35951 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LdlrP35951 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
LdlrP35951 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LdlrP35951 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
LdlrP35951 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
LdlrP35951 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LdlrP35951 Mir5133-201ENSMUST00000174955 77 ntBASIC17.86■□□□□ 0.45
LdlrP35951 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.86■□□□□ 0.45
LdlrP35951 Gm4968-201ENSMUST00000071458 858 ntBASIC17.86■□□□□ 0.45
LdlrP35951 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LdlrP35951 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LdlrP35951 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LdlrP35951 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LdlrP35951 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LdlrP35951 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LdlrP35951 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LdlrP35951 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
LdlrP35951 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LdlrP35951 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LdlrP35951 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
LdlrP35951 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LdlrP35951 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
LdlrP35951 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LdlrP35951 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.85■□□□□ 0.45
LdlrP35951 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.85■□□□□ 0.45
LdlrP35951 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LdlrP35951 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LdlrP35951 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LdlrP35951 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LdlrP35951 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LdlrP35951 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.85■□□□□ 0.45
LdlrP35951 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.85■□□□□ 0.45
LdlrP35951 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.85■□□□□ 0.45
LdlrP35951 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LdlrP35951 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
LdlrP35951 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LdlrP35951 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LdlrP35951 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LdlrP35951 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
LdlrP35951 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LdlrP35951 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
LdlrP35951 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
LdlrP35951 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms