Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RxrbP28704 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RxrbP28704 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
RxrbP28704 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RxrbP28704 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RxrbP28704 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RxrbP28704 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RxrbP28704 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.09■□□□□ 0.49
RxrbP28704 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RxrbP28704 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RxrbP28704 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
RxrbP28704 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.09■□□□□ 0.49
RxrbP28704 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
RxrbP28704 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RxrbP28704 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RxrbP28704 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
RxrbP28704 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RxrbP28704 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.09■□□□□ 0.49
RxrbP28704 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RxrbP28704 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
RxrbP28704 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.09■□□□□ 0.49
RxrbP28704 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RxrbP28704 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RxrbP28704 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
RxrbP28704 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.08■□□□□ 0.49
RxrbP28704 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
RxrbP28704 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RxrbP28704 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
RxrbP28704 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RxrbP28704 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RxrbP28704 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
RxrbP28704 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
RxrbP28704 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RxrbP28704 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
RxrbP28704 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
RxrbP28704 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RxrbP28704 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RxrbP28704 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
RxrbP28704 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
RxrbP28704 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RxrbP28704 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RxrbP28704 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.08■□□□□ 0.48
RxrbP28704 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RxrbP28704 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.08■□□□□ 0.48
RxrbP28704 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RxrbP28704 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
RxrbP28704 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RxrbP28704 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
RxrbP28704 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
RxrbP28704 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.07■□□□□ 0.48
RxrbP28704 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RxrbP28704 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
RxrbP28704 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RxrbP28704 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RxrbP28704 Gm37166-201ENSMUST00000195473 2474 ntBASIC18.07■□□□□ 0.48
RxrbP28704 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RxrbP28704 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RxrbP28704 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RxrbP28704 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.07■□□□□ 0.48
RxrbP28704 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.07■□□□□ 0.48
RxrbP28704 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RxrbP28704 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RxrbP28704 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RxrbP28704 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.07■□□□□ 0.48
RxrbP28704 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RxrbP28704 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
RxrbP28704 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RxrbP28704 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RxrbP28704 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
RxrbP28704 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RxrbP28704 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RxrbP28704 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
RxrbP28704 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RxrbP28704 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
RxrbP28704 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.06■□□□□ 0.48
RxrbP28704 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.06■□□□□ 0.48
RxrbP28704 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
RxrbP28704 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RxrbP28704 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
RxrbP28704 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RxrbP28704 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.06■□□□□ 0.48
RxrbP28704 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RxrbP28704 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.05■□□□□ 0.48
RxrbP28704 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RxrbP28704 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RxrbP28704 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RxrbP28704 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RxrbP28704 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RxrbP28704 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.05■□□□□ 0.48
RxrbP28704 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RxrbP28704 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RxrbP28704 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.05■□□□□ 0.48
RxrbP28704 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.05■□□□□ 0.48
RxrbP28704 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.05■□□□□ 0.48
RxrbP28704 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.05■□□□□ 0.48
RxrbP28704 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RxrbP28704 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
RxrbP28704 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.05■□□□□ 0.48
RxrbP28704 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RxrbP28704 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms