Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pde6aP27664 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.9■□□□□ 0.94
Pde6aP27664 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pde6aP27664 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pde6aP27664 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pde6aP27664 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Pde6aP27664 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Pde6aP27664 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pde6aP27664 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pde6aP27664 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Pde6aP27664 Gm13158-201ENSMUST00000122007 736 ntBASIC20.89■□□□□ 0.93
Pde6aP27664 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Pde6aP27664 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pde6aP27664 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pde6aP27664 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pde6aP27664 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.93
Pde6aP27664 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pde6aP27664 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pde6aP27664 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pde6aP27664 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Pde6aP27664 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Pde6aP27664 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Pde6aP27664 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pde6aP27664 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Pde6aP27664 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pde6aP27664 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Pde6aP27664 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pde6aP27664 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Pde6aP27664 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pde6aP27664 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Pde6aP27664 Mir2861-201ENSMUST00000175539 82 ntBASIC20.88■□□□□ 0.93
Pde6aP27664 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC20.88■□□□□ 0.93
Pde6aP27664 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pde6aP27664 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pde6aP27664 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pde6aP27664 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Pde6aP27664 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pde6aP27664 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pde6aP27664 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC20.87■□□□□ 0.93
Pde6aP27664 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pde6aP27664 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pde6aP27664 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pde6aP27664 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pde6aP27664 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pde6aP27664 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pde6aP27664 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pde6aP27664 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Pde6aP27664 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Pde6aP27664 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pde6aP27664 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Pde6aP27664 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pde6aP27664 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.87■□□□□ 0.93
Pde6aP27664 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pde6aP27664 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC20.86■□□□□ 0.93
Pde6aP27664 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pde6aP27664 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pde6aP27664 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Pde6aP27664 Gm10138-203ENSMUST00000206952 366 ntBASIC20.86■□□□□ 0.93
Pde6aP27664 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Pde6aP27664 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pde6aP27664 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pde6aP27664 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pde6aP27664 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Pde6aP27664 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Pde6aP27664 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Pde6aP27664 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Pde6aP27664 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pde6aP27664 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pde6aP27664 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC20.85■□□□□ 0.93
Pde6aP27664 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pde6aP27664 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC20.85■□□□□ 0.93
Pde6aP27664 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.85■□□□□ 0.93
Pde6aP27664 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.85■□□□□ 0.93
Pde6aP27664 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Pde6aP27664 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Pde6aP27664 Gm5643-201ENSMUST00000117081 966 ntBASIC20.85■□□□□ 0.93
Pde6aP27664 Gm5297-201ENSMUST00000198555 1171 ntBASIC20.85■□□□□ 0.93
Pde6aP27664 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC20.85■□□□□ 0.93
Pde6aP27664 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC20.85■□□□□ 0.93
Pde6aP27664 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pde6aP27664 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pde6aP27664 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Pde6aP27664 Gm45141-201ENSMUST00000206502 1888 ntBASIC20.85■□□□□ 0.93
Pde6aP27664 Gm5828-201ENSMUST00000071842 1860 ntBASIC20.85■□□□□ 0.93
Pde6aP27664 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pde6aP27664 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Pde6aP27664 Gm45560-201ENSMUST00000211492 1472 ntBASIC20.84■□□□□ 0.93
Pde6aP27664 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pde6aP27664 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pde6aP27664 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pde6aP27664 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Pde6aP27664 Dmtn-207ENSMUST00000228001 2437 ntBASIC20.84■□□□□ 0.93
Pde6aP27664 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC20.83■□□□□ 0.93
Pde6aP27664 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pde6aP27664 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pde6aP27664 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pde6aP27664 Gm15375-201ENSMUST00000119510 849 ntBASIC20.83■□□□□ 0.93
Pde6aP27664 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC20.83■□□□□ 0.93
Pde6aP27664 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.83■□□□□ 0.93
Pde6aP27664 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms