Protein–RNA interactions for Protein: P12399

Ctla2a, Protein CTLA-2-alpha, mousemouse

Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctla2aP12399 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ctla2aP12399 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ctla2aP12399 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Ctla2aP12399 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ctla2aP12399 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ctla2aP12399 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ctla2aP12399 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ctla2aP12399 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ctla2aP12399 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.24■□□□□ 0.19
Ctla2aP12399 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ctla2aP12399 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Ctla2aP12399 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ctla2aP12399 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ctla2aP12399 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ctla2aP12399 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Ctla2aP12399 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ctla2aP12399 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ctla2aP12399 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Ctla2aP12399 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ctla2aP12399 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ctla2aP12399 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Ctla2aP12399 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ctla2aP12399 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ctla2aP12399 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ctla2aP12399 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC16.23■□□□□ 0.19
Ctla2aP12399 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ctla2aP12399 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ctla2aP12399 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ctla2aP12399 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ctla2aP12399 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ctla2aP12399 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ctla2aP12399 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ctla2aP12399 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ctla2aP12399 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Ctla2aP12399 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ctla2aP12399 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ctla2aP12399 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ctla2aP12399 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ctla2aP12399 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.22■□□□□ 0.19
Ctla2aP12399 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ctla2aP12399 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC16.22■□□□□ 0.19
Ctla2aP12399 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC16.22■□□□□ 0.19
Ctla2aP12399 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC16.22■□□□□ 0.19
Ctla2aP12399 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
Ctla2aP12399 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ctla2aP12399 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ctla2aP12399 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Ctla2aP12399 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ctla2aP12399 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ctla2aP12399 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ctla2aP12399 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.22■□□□□ 0.19
Ctla2aP12399 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ctla2aP12399 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ctla2aP12399 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ctla2aP12399 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Ctla2aP12399 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.22■□□□□ 0.19
Ctla2aP12399 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ctla2aP12399 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ctla2aP12399 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ctla2aP12399 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ctla2aP12399 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Ctla2aP12399 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ctla2aP12399 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ctla2aP12399 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Ctla2aP12399 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ctla2aP12399 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ctla2aP12399 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ctla2aP12399 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ctla2aP12399 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ctla2aP12399 Gm15546-201ENSMUST00000122095 826 ntBASIC16.21■□□□□ 0.19
Ctla2aP12399 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC16.21■□□□□ 0.19
Ctla2aP12399 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ctla2aP12399 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ctla2aP12399 Gm5812-201ENSMUST00000061073 957 ntBASIC16.21■□□□□ 0.19
Ctla2aP12399 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ctla2aP12399 Haglr-201ENSMUST00000100000 2085 ntBASIC16.21■□□□□ 0.19
Ctla2aP12399 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ctla2aP12399 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ctla2aP12399 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Ctla2aP12399 Tgds-204ENSMUST00000228543 1594 ntBASIC16.21■□□□□ 0.18
Ctla2aP12399 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.21■□□□□ 0.18
Ctla2aP12399 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.18
Ctla2aP12399 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ctla2aP12399 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ctla2aP12399 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
Ctla2aP12399 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ctla2aP12399 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ctla2aP12399 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ctla2aP12399 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ctla2aP12399 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ctla2aP12399 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Ctla2aP12399 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.2■□□□□ 0.18
Ctla2aP12399 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ctla2aP12399 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ctla2aP12399 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ctla2aP12399 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ctla2aP12399 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Ctla2aP12399 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Ctla2aP12399 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ctla2aP12399 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms