Protein–RNA interactions for Protein: P01727

Ig lambda-1 chain V region S43, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01727 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
P01727 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
P01727 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
P01727 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
P01727 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
P01727 Gm11643-201ENSMUST00000119578 864 ntBASIC14.35□□□□□ -0.11
P01727 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC14.35□□□□□ -0.11
P01727 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
P01727 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC14.35□□□□□ -0.11
P01727 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
P01727 Krtap5-1-202ENSMUST00000188274 742 ntBASIC14.35□□□□□ -0.11
P01727 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
P01727 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
P01727 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
P01727 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
P01727 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
P01727 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
P01727 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
P01727 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
P01727 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
P01727 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P01727 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
P01727 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
P01727 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
P01727 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
P01727 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
P01727 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P01727 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P01727 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
P01727 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P01727 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
P01727 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P01727 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P01727 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
P01727 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC14.34□□□□□ -0.11
P01727 Mir5122-201ENSMUST00000175004 89 ntBASIC14.34□□□□□ -0.11
P01727 Gm37805-201ENSMUST00000192612 1094 ntBASIC14.34□□□□□ -0.11
P01727 Gm18025-201ENSMUST00000221733 862 ntBASIC14.34□□□□□ -0.11
P01727 AC175538.1-201ENSMUST00000225343 1269 ntBASIC14.34□□□□□ -0.11
P01727 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P01727 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P01727 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P01727 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
P01727 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P01727 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P01727 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P01727 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
P01727 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC14.33□□□□□ -0.11
P01727 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
P01727 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
P01727 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
P01727 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
P01727 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
P01727 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
P01727 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
P01727 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
P01727 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
P01727 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC14.33□□□□□ -0.12
P01727 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
P01727 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
P01727 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
P01727 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
P01727 Gm5112-201ENSMUST00000204407 2368 ntBASIC14.33□□□□□ -0.12
P01727 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
P01727 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
P01727 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
P01727 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
P01727 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
P01727 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
P01727 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
P01727 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
P01727 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
P01727 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
P01727 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
P01727 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
P01727 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
P01727 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
P01727 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
P01727 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
P01727 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
P01727 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
P01727 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
P01727 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
P01727 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
P01727 Gm43183-201ENSMUST00000200632 547 ntBASIC14.32□□□□□ -0.12
P01727 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
P01727 AC135963.1-201ENSMUST00000211640 717 ntBASIC14.32□□□□□ -0.12
P01727 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
P01727 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC14.32□□□□□ -0.12
P01727 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
P01727 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
P01727 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
P01727 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
P01727 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
P01727 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
P01727 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
P01727 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC14.31□□□□□ -0.12
P01727 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
P01727 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
P01727 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms