Protein–RNA interactions for Protein: P00375

Dhfr, Dihydrofolate reductase, mousemouse

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DhfrP00375 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
DhfrP00375 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
DhfrP00375 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
DhfrP00375 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
DhfrP00375 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
DhfrP00375 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
DhfrP00375 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
DhfrP00375 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
DhfrP00375 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
DhfrP00375 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
DhfrP00375 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
DhfrP00375 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
DhfrP00375 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
DhfrP00375 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
DhfrP00375 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
DhfrP00375 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
DhfrP00375 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
DhfrP00375 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
DhfrP00375 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
DhfrP00375 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
DhfrP00375 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
DhfrP00375 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
DhfrP00375 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
DhfrP00375 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
DhfrP00375 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
DhfrP00375 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
DhfrP00375 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
DhfrP00375 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.22■□□□□ 0.19
DhfrP00375 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
DhfrP00375 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
DhfrP00375 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
DhfrP00375 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
DhfrP00375 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
DhfrP00375 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
DhfrP00375 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
DhfrP00375 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
DhfrP00375 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
DhfrP00375 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
DhfrP00375 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
DhfrP00375 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
DhfrP00375 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
DhfrP00375 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
DhfrP00375 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC16.21■□□□□ 0.19
DhfrP00375 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
DhfrP00375 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
DhfrP00375 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC16.21■□□□□ 0.19
DhfrP00375 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
DhfrP00375 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC16.21■□□□□ 0.19
DhfrP00375 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
DhfrP00375 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
DhfrP00375 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
DhfrP00375 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
DhfrP00375 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
DhfrP00375 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.21■□□□□ 0.18
DhfrP00375 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
DhfrP00375 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
DhfrP00375 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
DhfrP00375 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
DhfrP00375 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
DhfrP00375 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
DhfrP00375 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
DhfrP00375 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
DhfrP00375 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
DhfrP00375 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
DhfrP00375 Gm42778-201ENSMUST00000199644 553 ntBASIC16.2■□□□□ 0.18
DhfrP00375 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
DhfrP00375 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
DhfrP00375 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.2■□□□□ 0.18
DhfrP00375 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
DhfrP00375 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
DhfrP00375 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
DhfrP00375 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
DhfrP00375 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
DhfrP00375 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
DhfrP00375 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
DhfrP00375 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
DhfrP00375 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
DhfrP00375 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
DhfrP00375 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
DhfrP00375 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
DhfrP00375 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
DhfrP00375 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC16.19■□□□□ 0.18
DhfrP00375 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.19■□□□□ 0.18
DhfrP00375 Gm18284-201ENSMUST00000172604 624 ntBASIC16.19■□□□□ 0.18
DhfrP00375 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
DhfrP00375 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
DhfrP00375 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
DhfrP00375 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
DhfrP00375 Gm9988-201ENSMUST00000069786 435 ntBASIC16.19■□□□□ 0.18
DhfrP00375 Gm5874-201ENSMUST00000096101 508 ntBASIC16.19■□□□□ 0.18
DhfrP00375 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
DhfrP00375 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
DhfrP00375 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.19■□□□□ 0.18
DhfrP00375 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
DhfrP00375 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
DhfrP00375 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
DhfrP00375 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
DhfrP00375 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
DhfrP00375 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
DhfrP00375 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms