Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Syn1O88935 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.54■□□□□ 0.56
Syn1O88935 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.54■□□□□ 0.56
Syn1O88935 Mir6349-201ENSMUST00000184059 97 ntBASIC18.54■□□□□ 0.56
Syn1O88935 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Syn1O88935 Gm6443-201ENSMUST00000203599 874 ntBASIC18.54■□□□□ 0.56
Syn1O88935 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.54■□□□□ 0.56
Syn1O88935 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Syn1O88935 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Syn1O88935 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Syn1O88935 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Syn1O88935 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Syn1O88935 Gm38285-201ENSMUST00000192928 922 ntBASIC18.53■□□□□ 0.56
Syn1O88935 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.53■□□□□ 0.56
Syn1O88935 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Syn1O88935 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Syn1O88935 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
Syn1O88935 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Syn1O88935 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Syn1O88935 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Syn1O88935 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Syn1O88935 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.52■□□□□ 0.56
Syn1O88935 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC18.52■□□□□ 0.56
Syn1O88935 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Syn1O88935 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Syn1O88935 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Syn1O88935 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Syn1O88935 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Syn1O88935 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.51■□□□□ 0.55
Syn1O88935 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Syn1O88935 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Syn1O88935 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
Syn1O88935 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Syn1O88935 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Syn1O88935 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Syn1O88935 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Syn1O88935 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.51■□□□□ 0.55
Syn1O88935 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Syn1O88935 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Syn1O88935 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Syn1O88935 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Syn1O88935 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Syn1O88935 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Syn1O88935 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC18.5■□□□□ 0.55
Syn1O88935 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.5■□□□□ 0.55
Syn1O88935 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Syn1O88935 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Syn1O88935 Golph3-202ENSMUST00000226517 2359 ntBASIC18.5■□□□□ 0.55
Syn1O88935 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Syn1O88935 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Syn1O88935 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
Syn1O88935 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Syn1O88935 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Syn1O88935 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Syn1O88935 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.49■□□□□ 0.55
Syn1O88935 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Syn1O88935 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Syn1O88935 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Syn1O88935 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Syn1O88935 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC18.49■□□□□ 0.55
Syn1O88935 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.49■□□□□ 0.55
Syn1O88935 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Syn1O88935 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Syn1O88935 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Syn1O88935 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Syn1O88935 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Syn1O88935 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Syn1O88935 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Syn1O88935 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Syn1O88935 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Syn1O88935 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Syn1O88935 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Syn1O88935 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Syn1O88935 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Syn1O88935 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Syn1O88935 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Syn1O88935 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Syn1O88935 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Syn1O88935 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Syn1O88935 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Syn1O88935 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Syn1O88935 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Syn1O88935 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Syn1O88935 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Syn1O88935 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.48■□□□□ 0.55
Syn1O88935 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Syn1O88935 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Syn1O88935 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.47■□□□□ 0.55
Syn1O88935 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Syn1O88935 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Syn1O88935 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.47■□□□□ 0.55
Syn1O88935 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.47■□□□□ 0.55
Syn1O88935 Gm29518-201ENSMUST00000190858 372 ntBASIC18.47■□□□□ 0.55
Syn1O88935 Gm38027-201ENSMUST00000192315 235 ntBASIC18.47■□□□□ 0.55
Syn1O88935 Gm5587-201ENSMUST00000206270 674 ntBASIC18.47■□□□□ 0.55
Syn1O88935 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Syn1O88935 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.47■□□□□ 0.55
Syn1O88935 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Syn1O88935 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Syn1O88935 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms