Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hcn1O88704 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Hcn1O88704 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.23■□□□□ 0.35
Hcn1O88704 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Hcn1O88704 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Hcn1O88704 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Hcn1O88704 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Hcn1O88704 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Hcn1O88704 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hcn1O88704 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hcn1O88704 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hcn1O88704 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Hcn1O88704 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.22■□□□□ 0.35
Hcn1O88704 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.22■□□□□ 0.35
Hcn1O88704 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hcn1O88704 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.22■□□□□ 0.35
Hcn1O88704 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
Hcn1O88704 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hcn1O88704 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hcn1O88704 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.22■□□□□ 0.35
Hcn1O88704 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hcn1O88704 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hcn1O88704 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hcn1O88704 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Hcn1O88704 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hcn1O88704 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hcn1O88704 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hcn1O88704 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
Hcn1O88704 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Hcn1O88704 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Hcn1O88704 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hcn1O88704 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hcn1O88704 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Hcn1O88704 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Hcn1O88704 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hcn1O88704 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Hcn1O88704 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Hcn1O88704 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hcn1O88704 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Hcn1O88704 Gm13148-201ENSMUST00000118892 745 ntBASIC17.2■□□□□ 0.34
Hcn1O88704 Gm6211-202ENSMUST00000167849 925 ntBASIC17.2■□□□□ 0.34
Hcn1O88704 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.2■□□□□ 0.34
Hcn1O88704 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hcn1O88704 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hcn1O88704 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Hcn1O88704 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hcn1O88704 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hcn1O88704 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hcn1O88704 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hcn1O88704 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hcn1O88704 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.2■□□□□ 0.34
Hcn1O88704 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Hcn1O88704 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Hcn1O88704 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hcn1O88704 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hcn1O88704 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.2■□□□□ 0.34
Hcn1O88704 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Hcn1O88704 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hcn1O88704 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.19■□□□□ 0.34
Hcn1O88704 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hcn1O88704 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Hcn1O88704 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.19■□□□□ 0.34
Hcn1O88704 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.19■□□□□ 0.34
Hcn1O88704 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.19■□□□□ 0.34
Hcn1O88704 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hcn1O88704 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hcn1O88704 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hcn1O88704 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Hcn1O88704 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hcn1O88704 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.18■□□□□ 0.34
Hcn1O88704 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hcn1O88704 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Hcn1O88704 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.18■□□□□ 0.34
Hcn1O88704 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.18■□□□□ 0.34
Hcn1O88704 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
Hcn1O88704 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hcn1O88704 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.18■□□□□ 0.34
Hcn1O88704 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hcn1O88704 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hcn1O88704 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hcn1O88704 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Hcn1O88704 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Hcn1O88704 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hcn1O88704 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hcn1O88704 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hcn1O88704 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hcn1O88704 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hcn1O88704 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.17■□□□□ 0.34
Hcn1O88704 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Hcn1O88704 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hcn1O88704 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Hcn1O88704 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hcn1O88704 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hcn1O88704 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
Hcn1O88704 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hcn1O88704 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hcn1O88704 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hcn1O88704 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.17■□□□□ 0.34
Hcn1O88704 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hcn1O88704 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms