Protein–RNA interactions for Protein: O88597

Becn1, Beclin-1, mousemouse

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Becn1O88597 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Becn1O88597 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Becn1O88597 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Becn1O88597 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Becn1O88597 Gm8969-201ENSMUST00000199694 526 ntBASIC20.6■□□□□ 0.89
Becn1O88597 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Becn1O88597 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Becn1O88597 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
Becn1O88597 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Becn1O88597 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Becn1O88597 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Becn1O88597 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC20.59■□□□□ 0.89
Becn1O88597 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Becn1O88597 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Becn1O88597 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Becn1O88597 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Becn1O88597 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Becn1O88597 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
Becn1O88597 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Becn1O88597 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Becn1O88597 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Becn1O88597 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Becn1O88597 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.58■□□□□ 0.89
Becn1O88597 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Becn1O88597 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Becn1O88597 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Becn1O88597 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
Becn1O88597 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Becn1O88597 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Becn1O88597 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Becn1O88597 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Becn1O88597 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Becn1O88597 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Becn1O88597 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Becn1O88597 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.57■□□□□ 0.88
Becn1O88597 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Becn1O88597 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Becn1O88597 Gm45906-201ENSMUST00000208911 1430 ntBASIC20.57■□□□□ 0.88
Becn1O88597 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Becn1O88597 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Becn1O88597 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
Becn1O88597 Gm6139-201ENSMUST00000079261 882 ntBASIC20.57■□□□□ 0.88
Becn1O88597 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Becn1O88597 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Becn1O88597 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Becn1O88597 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Becn1O88597 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Becn1O88597 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Becn1O88597 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Becn1O88597 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Becn1O88597 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Becn1O88597 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Becn1O88597 Gm15039-201ENSMUST00000118914 875 ntBASIC20.56■□□□□ 0.88
Becn1O88597 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Becn1O88597 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
Becn1O88597 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.56■□□□□ 0.88
Becn1O88597 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Becn1O88597 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC20.56■□□□□ 0.88
Becn1O88597 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Becn1O88597 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Becn1O88597 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.56■□□□□ 0.88
Becn1O88597 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Becn1O88597 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Becn1O88597 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC20.55■□□□□ 0.88
Becn1O88597 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Becn1O88597 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Becn1O88597 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.55■□□□□ 0.88
Becn1O88597 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.55■□□□□ 0.88
Becn1O88597 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Becn1O88597 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Becn1O88597 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Becn1O88597 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Becn1O88597 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.55■□□□□ 0.88
Becn1O88597 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
Becn1O88597 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC20.54■□□□□ 0.88
Becn1O88597 Gm12251-201ENSMUST00000117893 792 ntBASIC20.54■□□□□ 0.88
Becn1O88597 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Becn1O88597 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Becn1O88597 Gm8493-201ENSMUST00000196881 489 ntBASIC20.54■□□□□ 0.88
Becn1O88597 Spcs1-204ENSMUST00000226782 949 ntBASIC20.54■□□□□ 0.88
Becn1O88597 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Becn1O88597 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Becn1O88597 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Becn1O88597 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Becn1O88597 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Becn1O88597 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Becn1O88597 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Becn1O88597 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Becn1O88597 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Becn1O88597 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Becn1O88597 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Becn1O88597 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Becn1O88597 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Becn1O88597 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Becn1O88597 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Becn1O88597 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Becn1O88597 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Becn1O88597 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Becn1O88597 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Becn1O88597 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms