Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tnfrsf17O88472 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tnfrsf17O88472 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tnfrsf17O88472 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tnfrsf17O88472 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.73■□□□□ 0.27
Tnfrsf17O88472 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tnfrsf17O88472 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tnfrsf17O88472 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Tnfrsf17O88472 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Tnfrsf17O88472 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tnfrsf17O88472 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.72■□□□□ 0.27
Tnfrsf17O88472 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.72■□□□□ 0.27
Tnfrsf17O88472 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Tnfrsf17O88472 Gm13474-201ENSMUST00000122466 815 ntBASIC16.72■□□□□ 0.27
Tnfrsf17O88472 Mir3081-201ENSMUST00000175305 84 ntBASIC16.72■□□□□ 0.27
Tnfrsf17O88472 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Tnfrsf17O88472 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.72■□□□□ 0.27
Tnfrsf17O88472 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tnfrsf17O88472 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tnfrsf17O88472 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Tnfrsf17O88472 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tnfrsf17O88472 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Tnfrsf17O88472 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Tnfrsf17O88472 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Tnfrsf17O88472 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tnfrsf17O88472 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tnfrsf17O88472 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tnfrsf17O88472 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Tnfrsf17O88472 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Tnfrsf17O88472 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Tnfrsf17O88472 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.71■□□□□ 0.27
Tnfrsf17O88472 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tnfrsf17O88472 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.71■□□□□ 0.27
Tnfrsf17O88472 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tnfrsf17O88472 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Tnfrsf17O88472 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tnfrsf17O88472 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tnfrsf17O88472 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tnfrsf17O88472 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Tnfrsf17O88472 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.26
Tnfrsf17O88472 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tnfrsf17O88472 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Tnfrsf17O88472 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tnfrsf17O88472 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Tnfrsf17O88472 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tnfrsf17O88472 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tnfrsf17O88472 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tnfrsf17O88472 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Tnfrsf17O88472 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Tnfrsf17O88472 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tnfrsf17O88472 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tnfrsf17O88472 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tnfrsf17O88472 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Tnfrsf17O88472 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.7■□□□□ 0.26
Tnfrsf17O88472 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.7■□□□□ 0.26
Tnfrsf17O88472 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tnfrsf17O88472 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tnfrsf17O88472 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Tnfrsf17O88472 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tnfrsf17O88472 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Tnfrsf17O88472 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tnfrsf17O88472 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC16.69■□□□□ 0.26
Tnfrsf17O88472 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tnfrsf17O88472 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tnfrsf17O88472 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tnfrsf17O88472 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC16.69■□□□□ 0.26
Tnfrsf17O88472 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Tnfrsf17O88472 Gm27357-201ENSMUST00000183754 135 ntBASIC16.69■□□□□ 0.26
Tnfrsf17O88472 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.69■□□□□ 0.26
Tnfrsf17O88472 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tnfrsf17O88472 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tnfrsf17O88472 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Tnfrsf17O88472 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Tnfrsf17O88472 Spr-ps1-201ENSMUST00000089584 605 ntBASIC16.69■□□□□ 0.26
Tnfrsf17O88472 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tnfrsf17O88472 Snhg20-203ENSMUST00000182811 2153 ntBASIC16.69■□□□□ 0.26
Tnfrsf17O88472 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Tnfrsf17O88472 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tnfrsf17O88472 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tnfrsf17O88472 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tnfrsf17O88472 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tnfrsf17O88472 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tnfrsf17O88472 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tnfrsf17O88472 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tnfrsf17O88472 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.68■□□□□ 0.26
Tnfrsf17O88472 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tnfrsf17O88472 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tnfrsf17O88472 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tnfrsf17O88472 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.68■□□□□ 0.26
Tnfrsf17O88472 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.68■□□□□ 0.26
Tnfrsf17O88472 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Tnfrsf17O88472 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tnfrsf17O88472 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tnfrsf17O88472 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Tnfrsf17O88472 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Tnfrsf17O88472 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.67■□□□□ 0.26
Tnfrsf17O88472 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tnfrsf17O88472 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Tnfrsf17O88472 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Tnfrsf17O88472 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms